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Job DescriptionP52095
Confidence99.43%DateThu Jan 5 12:05:15 GMT 2012
Rank191Aligned Residues295
% Identity12%Templatec2zsmA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.. .......240.........250.........
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Query Sequence  HTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAA. . PSGSTLLIDRNCHKSLAHLLMMNDVVP. . . . . . . . . . .
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Template Sequence  GEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGGVPTSAGVPEAVAR
Template Known Secondary structure 
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SSGGGS


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   95....100.........110.........120.........130.........140.........150.........160.........170....
 
   260.........270.........280.........290.........300........ .310... ......320...... ...330
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Query Sequence  . VWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY. . . DGLLY. . . NTDWIKQTLDVPS. . IHFD
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Template Sequence  LTLVTPYN. . . . . . . . . . . . . . DVEALERVFAEYGDRIA. . . GVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILD
Template Known Secondary structure  TTT..............
GGG...
SSB
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   181....... .190.........200..... ....210.........220.........230.........240...
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  SAWVPYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVE
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Template Sequence  EVVTG. FRLGLEGAQG. . . . . . YFNIEGDIIVLGKIIGGG. FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGL
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TTTT.TTSSTT......T


SGGGGTT.SS

TTBTTTSSB



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   244.... .250........ .260.........270...... ...280.........290.........300.........310.....
 
   411........420.........430.........440.........450.........460.........470.........480.........490
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Query Sequence  TAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVK
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Template Sequence  ATLKALEEE. . . PVYSVSREAAKALEEAASEVL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DRTG
Template Known Secondary structure  S...
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   316...320.... .....330.........340..... ....
 
   491........500. ........510 .........520.........530.........540.........550......
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Query Sequence  VTILTPGMDEQ. GNMSEEGIP. . . . . . . . . . . . . AALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEF
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Template Sequence  LPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFI. . APSNLEAVFTGLPHQGEALEIAVEGLRSS
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TTT
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   350.........360.........370.........380.........390........ .400.........410.........420.......
 
   557..560
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Query Sequence  KRSY
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Template Conservation 
  
Template Sequence  LKTV
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   428.430.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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