Job Description P52095 Confidence 99.48% Date Thu Jan 5 12:05:15 GMT 2012 Rank 185 Aligned Residues 327 % Identity 12% Template c2x5fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartate_tyrosine_phenylalanine pyridoxal-5' PDBTitle: crystal structure of the methicillin-resistant2 staphylococcus aureus sar2028, an3 aspartate_tyrosine_phenylalanine pyridoxal-5'-phosphate4 dependent aminotransferase Resolution 1.80 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.							.	.	.
Query SS confidence																										.	.	.	.	.							.	.	.
Query Sequence		T	E	L	G	S	L	L	D	H	T	G	P	H	L	E	A	E	E	Y	I	A	R	T	F	.	.	.	.	.	G	A	E	Q	S	Y	.	.	.	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	M	N	D
Query Conservation																										.	.	.	.	.							.	.	.
Alig confidence																										.	.	.	.	.							.	.	.
Template Conservation
Template Sequence		D	E	I	F	P	Y	A	P	P	Q	G	I	E	E	L	R	D	L	W	Q	Q	K	M	L	R	D	N	P	E	L	S	I	D	N	M	S	R	P	I	V	T	N	A	L	T	H	G	L	S	L	V	G	D	L	F	V	N	Q	D	D	T	I	L	L	P	E	H	N	W	G	N	Y	K	L	V	F	N	T	R	N
Template Known Secondary structure		G	G	T	S	S				T	T																		T	T			G	G	G	B							S																T	T							S	S			T							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.				.	.	.	.	.	320	.	.	.	.						.	.
Predicted Secondary structure																																																				.									.	.	.											.	.	.	.	.			.
Query SS confidence																																																				.									.	.	.											.	.	.	.	.			.
Query Sequence		V	V	P	V	W	L	K	P	T	R	N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	.	.	.	T	D	W	I	K	Q	T	L	D	V	.	.	.	.	.	P	S	.
Query Conservation																																																				.									.	.	.											.	.	.	.	.			.
Alig confidence																		.	.	.	.	.	.	.	.																		.	.								.									.	.	.											.	.	.	.	.			.
Template Conservation																		.	.	.	.	.	.	.	.																		.	.
Template Sequence		G	A	N	L	Q	T	Y	P	I	F	D	K	D	G	H	Y	.	.	.	.	.	.	.	.	T	T	D	S	L	V	E	A	L	Q	S	Y	N	K	D	K	V	.	.	I	M	I	L	N	Y	P	N	N	P	T	G	Y	T	P	T	H	K	E	V	T	T	I	V	E	A	I	K	A	L	A	N	K	G	T	K	V
Template Known Secondary structure											B		T	T	S		B	.	.	.	.	.	.	.	.		S												S	S			.	.						S	S		T	T	T																						T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
			327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.			.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure		.																																	.											.	.																.
Query SS confidence		.																																	.											.	.																.
Query Sequence		.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S	G	M	S	G	E	R	V	A	G	K	V	.	I	F	E	T	Q	S	T	H	K	M	.	.	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	.	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P
Query Conservation		.																																	.											.	.																.
Alig confidence		.																																	.											.	.																.
Template Conservation
Template Sequence		I	A	V	V	D	D	A	Y	Y	G	L	F	Y	E	D	V	Y	T	Q	S	L	F	T	A	L	T	N	L	H	S	N	A	I	L	P	I	R	L	D	G	A	T	K	E	F	F	A	W	G	F	R	V	G	F	M	T	F	G	T	S	D	Q	T	T	K	E	V	L	E	A	K	V	K	G	L	I	R	S	N	I
Template Known Secondary structure								T	T	T	T		B		S	S				S								T	T			T	T													T	T		G	G	G								B																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A
Query Conservation
Alig confidence																			.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	G	P	L	P	T	Q	S	A	V	K	H	V	L	K	N	.	.	N	K	Q	F	D	K	E	I	E	Q	N	I	Q	T	L	K	E	R	Y	E	V	T	K	E	V	V	Y	A	D	Q	Y	H	S	H	W	Q	A	Y	D	F	N	S	G	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S													T	T	T	.	.																											T		G	G	G	T	T	T								B	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	.	D	E	R	G	I	V	V	E	K	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y
Query Conservation																																							.
Alig confidence		.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.												.																					.
Template Conservation		.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	M	A	I	K	V	H	.	.	.	.	.	.	.	.	.	.	.	D	V	D	P	E	A	L	R	K	H	L	I	D	K	Y	S	I	G	V	I	A	L	N	A	T	D	I	R	I	A	F	S	.	C	V	E	K	D	D	I	P	H	V	F	D	S	I	A	K	A	I	D	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.						S	.	.	.	.	.	.	.	.	.	.	.	S	S													T								S	S	S						G	G	.	G	S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
											369	370	.	.	.	.												.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions