Job Description P52095 Confidence 99.87% Date Thu Jan 5 12:05:15 GMT 2012 Rank 31 Aligned Residues 299 % Identity 16% Template c2w8wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser Resolution 2.14 Å

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	G	P	H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	M	N	D	V	V	P	V	W	L	K	P	T	R	N	A	L	G	I	L
Query Conservation
Alig confidence																													.																																														.	.	.	.	.	.	.
Template Conservation																													.																																														.	.	.	.	.	.	.
Template Sequence		T	F	H	D	H	M	E	V	E	Q	A	L	R	D	F	Y	G	T	T	G	A	I	V	F	S	T	G	.	Y	M	A	N	L	G	I	I	S	T	L	A	G	K	G	E	Y	V	I	L	D	A	D	S	H	A	S	I	Y	D	G	C	Q	Q	G	N	A	E	I	V	R	F	R	H	N	.	.	.	.	.	.	.
Template Known Secondary structure																		T		S						S			.												S		T	T							T	T												S		S							T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.																																														.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																					.	.
Query SS confidence																																				.																					.	.
Query Sequence		G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S	G	M
Query Conservation																																				.																					.	.
Alig confidence		.	.	.	.	.	.	.	.																		.									.																					.	.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																		.																																																.	.	.
Template Sequence		.	.	.	.	.	.	.	.	S	V	E	D	L	D	K	R	L	G	R	L	P	K	E	P	A	.	K	L	V	V	L	E	G	V	Y	S	M	L	G	D	I	A	P	L	K	E	M	V	A	V	A	K	K	H	G	A	M	V	L	V	D	E	A	H	S	M	G	F	F	G	P	N	G	.	.	.	R	G	V	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.												S		S	S	S		.							S			T	T	T	T															T	T								T	T	T	T	T	T	S	S	T	T	S	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																		.																																																.	.	.
Template SS confidence
										180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.				.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V
Query Conservation
Alig confidence																										.	.	.																																												.
Template Conservation																										.	.	.																																												.
Template Sequence		E	A	Q	G	L	E	G	Q	I	D	F	V	V	G	T	F	S	K	S	V	G	T	V	G	.	.	.	G	F	V	V	S	N	H	P	K	F	E	A	V	R	L	A	C	R	P	Y	I	F	T	A	S	L	P	P	S	V	V	A	T	A	T	T	S	I	R	K	L	M	T	.	A	H	E	K	R	E	R	L	W
Template Known Secondary structure				T	T		T	T	T		S						S	T	T	T	T		S	S		.	.	.								T	T	G	G	G										T	S	B																		T	T	.
Template Predicted Secondary structure																										.	.	.																																												.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	N	A	R	A	L	H	G	G	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	F	R	L	G	T	E	T	C	D	S	A	I	V	A	V	M	L	E	D	Q	E
Template Known Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				S		S	S			S	S							S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.																																														.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530								.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	T	G	P	.	.	.	.	.	.	.	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S	Y
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	A	M	M	W	Q	A	L	L	D	G	G	L	Y	V	N	M	A	R	P	P	A	T	P	A	G	T	F	L	L	R	C	S	I	C	A	E	H	T	P	A	Q	I	Q	T	V	L	G	M	F	Q	A	A	G	R	A	V
Template Known Secondary structure													T	T								T	T	T	S		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions