Return to main results Retrieve Phyre Job Id

Job DescriptionP52095
Confidence87.94%DateThu Jan 5 12:05:15 GMT 2012
Rank329Aligned Residues105
% Identity15%Templatec2qv0A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:protein mrke; PDBTitle: crystal structure of the response regulatory domain of2 protein mrke from klebsiella pneumoniae
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.. .......40.........50.........60... ......70.........80.........90...
Predicted Secondary structure 


..












...







Query SS confidence 













. .






























. . .





























Query Sequence  IKELESALVAQGFQ. . IIWPQNSVDLLKFIEHNPRICGVIFDWDEYS. . . LDLCSDINQLNEYLPLYAFINTHSTMDVSV
Query Conservation     
          ..        
                      ...                              
Alig confidence 













..
















.












...






















..




Template Conservation     
   
        
  
    


      .  


  
  
    
      
        

  
   ..     
Template Sequence  QQELSWLINTHSQMEIVGSFDDGLDVLKFLQHN. KVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWK. . EHAVE
Template Known Secondary structure  S

S

.

S
SS
SSS
TTSTT

S

..TT
Template Predicted Secondary structure 





.

















..
Template SS confidence 















































































   70.........80.........90.........100.. .......110.........120.........130.........140. .....
 
   94.....100.........110.........120.......
Predicted Secondary structure 


Query SS confidence 

































Query Sequence  QDMRMALWFFEYALGQAEDIAIRMRQYTDEYLDN
Query Conservation                         
      
   
Alig confidence 





















.










Template Conservation 
   

  

 

     
   .
          
Template Sequence  AFELEAFDYILKPYQESRIINM. LQKLTTAWEQQ
Template Known Secondary structure  TT
SSS

.
Template Predicted Secondary structure 







.

Template SS confidence 

































   147..150.........160........ .170.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions