Job Description P52095 Confidence 20.32% Date Thu Jan 5 12:05:15 GMT 2012 Rank 472 Aligned Residues 94 % Identity 21% Template c2qipA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:protein of unknown function vpa0982; PDBTitle: crystal structure of a protein of unknown function vpa0982 from vibrio2 parahaemolyticus rimd 2210633 Resolution 1.48 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.					.	.	.																	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.					.	.	.																	.
Query Sequence		G	V	F	Y	K	D	E	P	I	K	E	L	E	S	A	L	V	A	Q	G	F	Q	I	I	W	P	Q	.	.	.	.	.	.	.	.	.	.	N	S	V	D	.	.	.	L	L	K	F	I	E	H	N	P	R	I	C	G	V	I	F	.	D	W	D	E	Y	S	L	D	L	C	S	D	I	N	Q	L	N	E	Y
Query Conservation																													.	.	.	.	.	.	.	.	.	.					.	.	.																	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.					.	.	.																	.
Template Conservation
Template Sequence		A	I	A	S	N	D	P	K	Q	R	Q	F	H	H	I	L	R	G	V	G	F	E	V	X	L	K	P	Y	I	Q	R	R	D	G	S	A	K	G	D	W	D	V	G	I	T	L	D	A	I	E	I	A	P	D	V	D	R	V	I	L	V	S	G	D	G	D	F	S	L	L	V	E	R	I	Q	Q	R	Y	N	K
Template Known Secondary structure																					T												S	S				S															G	G	G		S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	Y	A	F	I	N	T	H	S	T	M	D	V	S	V	Q	D	M	R	M	A	L	W	F	F	E	Y	A	L	G
Query Conservation
Alig confidence			.											.	.	.
Template Conservation			.											.	.	.
Template Sequence		K	.	V	T	V	Y	G	V	P	R	L	T	.	.	.	S	Q	T	L	I	D	C	A	D	N	F	V	A	I	D	D	D
Template Known Secondary structure			.							G	G	G	S	.	.	.								S	S						S	G	G
Template Predicted Secondary structure			.											.	.	.
Template SS confidence
		132		.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions