Job Description P52095 Confidence 99.66% Date Thu Jan 5 12:05:15 GMT 2012 Rank 118 Aligned Residues 309 % Identity 15% Template c2hdyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:selenocysteine lyase; PDBTitle: structure of human selenocysteine lyase Resolution 2.10 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.									.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																	.																					.	.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence																	.																					.	.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		H	L	E	A	E	E	Y	I	A	R	T	F	G	A	E	.	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	.	.	.	.	.	.	.	.	A	P	S	G	S	T	L	L	I	D	R	N	C	H	K	S	L	A	H	L	L	M	.	.	.	.	M	N	D	V	V	P	V	W	L	K
Query Conservation																	.																					.	.	.	.	.	.	.	.																							.	.	.	.
Alig confidence																	.																					.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation
Template Sequence		I	N	A	A	R	E	S	L	A	K	M	I	G	G	K	P	Q	D	I	I	F	T	S	G	G	T	E	S	N	N	L	V	I	H	S	V	V	K	H	F	H	A	N	Q	T	G	A	K	P	H	F	I	T	S	S	V	E	H	D	S	I	R	L	P	L	E	H	L	V	E	E	Q	V	A	A	V	T	F	V	P
Template Known Secondary structure														T			G	G	G					S																																T	T															T	T	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																																													.																					.	.
Query SS confidence																																													.																					.	.
Query Sequence		P	T	R	N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	R	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	.	T	Y	D	G	L	L	Y	N	T	D	W	I	K	Q	T	L	D	V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H
Query Conservation																																													.																					.	.
Alig confidence										.	.	.	.	.	.	.	.	.																.	.	.	.	.							.																					.	.
Template Conservation										.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		V	S	K	V	S	G	Q	T	.	.	.	.	.	.	.	.	.	E	V	D	D	I	L	A	A	V	R	P	T	T	R	L	.	.	.	.	.	V	T	I	M	L	A	N	N	E	T	G	I	V	M	P	V	P	E	I	S	Q	R	I	K	A	L	N	Q	E	R	V	A	A	G	L	P	P	I	L	V	H	T	D
Template Known Secondary structure				T	T	T	S	S		.	.	.	.	.	.	.	.	.								T			T	T				.	.	.	.	.					S	B		T	T	T		B	B																				T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390							.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		P	I	Y	Q	G	K	S	G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	D	E	E	A	F	N	.	.	.	.	.	.	E	A	F	M	M	H	T	T	T	S	P	S	Y	P	I	V	A	S	V	E	T	A	A	A
Query Conservation																																																				.	.	.	.	.	.
Alig confidence				.																													.	.																		.	.	.	.	.	.
Template Conservation				.																													.	.
Template Sequence		A	A	.	Q	A	L	G	K	Q	R	V	D	V	E	D	L	G	V	D	F	L	T	I	V	G	H	K	F	Y	G	P	.	.	R	I	G	A	L	Y	I	R	G	L	G	E	F	T	P	L	Y	P	M	L	F	G	G	G	Q	E	R	N	F	R	P	G	T	E	N	T	P	M	I	A	G	L	G	K	A	A	E
Template Known Secondary structure			T	.	T	T	T	T	T	S										S						G	G	G	T	T	S		.	.	S							T	T	B	T	T	T	B					S			S	S		G	G	G	G	T	S		S
Template Predicted Secondary structure				.																													.	.
Template SS confidence
		234	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	R	G	N	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A	D	H	M	F	L	D	P	V	K	V	T	I	L
Query Conservation
Alig confidence							.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	T	Q	N	.	C	E	A	Y	E	A	H	M	R	D	V	R	D	Y	L	E	E	R	L	E	A	E	F	G	Q	K	R	I	H	L	N	S	Q	F	P	G	T	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	N	T	C	N	F	S
Template Known Secondary structure							.																									G	G	G				S	S			T	T			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure							.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.																												.	.	.	.	.	360	.	.
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.																									.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	.	.	.	.	.	.	.	.	.	.	.	G	P	R	L	Q	G	H	V	V	L	A	Q	C	R	V	L	M	A	S	V	G	A	A	C	H	S	D	H	G	D	Q	P	S	P	V	L	L	S	Y	G	V	P	F	D	V	A	R	N	A	L	R	L	S	V	G	R	S	T	T	R	A	E	V	D	L	V	V
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.		T	T											S	S				B	S	S	S	S			S	S		S	S									T	T								T								S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		363	.												.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		551	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	L	T	E	F	K	R	S	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	L	K	Q	A	V	A	Q	L	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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