Job Description P52095 Confidence 99.33% Date Thu Jan 5 12:05:15 GMT 2012 Rank 205 Aligned Residues 297 % Identity 16% Template c2eo5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:419aa long hypothetical aminotransferase; PDBTitle: crystal structure of 4-aminobutyrate aminotransferase from sulfolobus2 tokodaii strain7 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.				210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																																			.																.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																			.																.	.	.	.	.	.	.	.	.	.
Query Sequence		H	T	G	P	H	L	E	A	E	E	Y	I	A	R	T	F	G	.	.	.	A	E	Q	S	Y	I	V	T	N	G	T	S	T	S	N	K	I	V	G	M	Y	A	A	P	S	G	S	T	L	L	I	D	R	N	.	C	H	K	S	L	A	H	L	L	M	M	N	D	V	V	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.																																			.																.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																			.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	N	I	P	Q	L	E	L	A	K	K	L	V	T	Y	S	P	G	N	F	Q	K	K	V	F	F	S	N	S	G	T	E	A	I	E	A	S	I	K	V	V	K	N	T	G	R	K	Y	I	I	A	F	L	G	G	F	H	G	R	T	F	G	S	I	S	L	T	A	S	K	A	V	Q	R	S	I	V	G	P	F
Template Known Secondary structure																	S	S		S	S								S	S														T	T	S								T	T					S	S									S		G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
								259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.					.	.	.	.	.	320	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																									.	.	.																											.	.							.	.	.	.
Query SS confidence		.	.	.	.	.	.																									.	.	.																											.	.							.	.	.	.
Query Sequence		.	.	.	.	.	.	P	V	W	L	K	P	T	R	N	A	L	G	I	L	G	G	I	P	R	R	E	F	T	R	.	.	.	D	S	I	E	E	K	V	A	A	T	T	Q	A	Q	W	P	V	H	A	V	I	T	N	S	T	Y	.	.	D	G	L	L	Y	N	.	.	.	.	T	D	W	I	K	Q	T	L	D
Query Conservation		.	.	.	.	.	.																									.	.	.																											.	.							.	.	.	.
Alig confidence		.	.	.	.	.	.																									.	.	.																											.	.							.	.	.	.
Template Conservation
Template Sequence		M	P	G	V	I	H	V	P	Y	P	N	P	Y	R	N	P	W	H	I	N	G	Y	E	N	P	S	E	L	V	N	R	V	I	E	F	I	E	D	Y	I	F	V	N	L	V	P	P	E	E	V	A	G	I	F	F	E	P	I	Q	G	E	G	G	Y	V	I	P	P	K	N	F	F	A	E	L	Q	K	L	A	K
Template Known Secondary structure			T	T									S	S	S		T	T				T	T	T																T					T			G	G	G								S	S	B	T	T	T	T	S	B				T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		324	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		V	P	S	.	.	I	H	F	D	S	A	W	V	P	Y	T	H	F	H	P	I	Y	Q	G	K	S	G	M	S	G	E	R	V	A	G	K	V	I	F	E	T	Q	S	T	H	K	M	L	A	A	L	S	Q	A	S	L	I	H	I	K	G	E	Y	D	E	E	A	F	N	E	A	F	M	M	H	T	T	T	S	P
Query Conservation					.	.
Alig confidence					.	.																					.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	G	I	L	L	V	D	D	E	V	Q	M	G	L	G	R	T	G	K	L	F	A	I	E	.	.	.	.	.	.	N	F	N	T	V	P	D	V	I	T	L	A	K	A	L	G	G	G	I	M	P	I	G	A	T	I	F	R	K	D	.	.	.	.	.	.	.	.	.	.	.	.	L	D	F	K	T	F	G
Template Known Secondary structure				T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	.	.	.	.	.	.	G	G	T				S						G	G	G	G	T	T	T	S									G	G	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																											.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.							.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.													.	300	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	P	I	V	A	S	V	E	T	A	A	A	M	L	R	G	N	P	G	K	R	L	I	N	R	S	V	E	R	A	L	H	F	R	K	E	V	Q	R	L	R	E	E	S	D	G	W	F	F	D	I	W	Q	P	P	Q	V	D	E	A	E	C	W	P	V	A	P	G	E	Q	W	H	G	F	N	D	A	D	A
Query Conservation
Alig confidence																	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	N	A	L	A	C	A	I	G	S	K	V	I	D	I	.	.	.	.	V	K	D	L	L	P	H	V	N	E	I	G	K	I	F	A	E	E	L	Q	G	L	A	D	D	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	.	.	.	.																				T	T	S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	M	F	L	D	P	V	K	V	T	I	L	T	P	G	M	D	E	Q	G	N	M	S	E	E	G	I	P	A	A	L	V	A	K	F	L	D	E	R	G	I	V	V	E	K	T	G	P	Y	N	L	L	F	L	F	S	I	G	I	D	K	T	K	A	M	G	L	L	R	G	L	T	E	F	K	R	S
Query Conservation
Alig confidence		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	I	G	L	A	W	G	L	E	Y	N	E	.	.	.	.	.	.	.	.	.	.	K	K	V	R	D	R	I	I	G	E	S	F	K	R	G	L	L	L	L	P	A	G	R	S	A	I	R	V	I	P	P	L	V	I	S	E	E	E	A	K	Q	G	L	D	I	L	K	K	V	I	K	V
Template Known Secondary structure		.	.	.	.	.		T	T							S		.	.	.	.	.	.	.	.	.	.														T	T							T	T	T								T	T
Template Predicted Secondary structure		.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template SS confidence
							355	.	.	.	.	360	.	.	.	.	.											.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions