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Job DescriptionP52095
Confidence99.24%DateThu Jan 5 12:05:15 GMT 2012
Rank215Aligned Residues330
% Identity14%Templatec2e7uA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160.........170.........180.........190.........200........ .210.........220.........
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Query Sequence  GHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTF. GAEQSYIVTNGTSTSNKIVGM
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Template Sequence  GHAH. . . . . . . . . . . . . . . . . . PKVLARVRE. TLERGLTFGAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRL
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BT
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TT

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   67..70 ......... 80.........90.........100.........110.........120.......
 
   230.. .......240.........250....... ..260.........270.........280.........290.........300...
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Query Sequence  YAA. . PSGSTLLIDRNCHKSLAHLLMMNDV. . . . VPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVI
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Template Sequence  ARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIA. . . AII
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TT





GGGS

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B
SSTT

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GGG...
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   128.130.........140.........150.........160.........170.........180.........190.........200. ...
 
   304.... .310...... ...320...... ...330.........340.........350.........360.........370......
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Query Sequence  TNSTY. . DGLLYNTD. . . WIKQTLDVPS. . IHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIFETQSTHKMLAALSQAS
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Template Sequence  FEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTG. FRLAFGGATE. . . . . . LLGLKPDLVTLGKILGGG. LPAAA
Template Known Secondary structure 
SSB
TTS
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GGGGT

TTTT.TTSSTT......T


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   205....210.........220.........230.........240... ......250... ......260.........270. .....
 
   377..380.........390.........400.........410.........420.........430.........440.........450......
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Query Sequence  LIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQP
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Template Sequence  YAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEEN. . PGYYAYLEDLGARLEAGLKEVLKE. . . . . . . . . . .
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TTBTTTSSB



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   277..280.........290.........300.........310......... 320.........330.........340...
 
   457..460.........470.........480.........490.........500.........510 .........520....
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Query Sequence  PQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEGIP. . . . . . . . . . . . AALVAKFLDERGIV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIY
Template Known Secondary structure  ..............................TT


TTSSSS


STTS
TTT
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   344.....350.........360.........370.........380.........390...
 
   525....530.........540.........550.....
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Query Sequence  VEKTGPYNLLFLFSIGIDKTKAMGLLRGLTE
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Template Sequence  WPPSN. . FEAAFLSVAHREEDVEKTLEALRK
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SSS..SS


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   394.... .400.........410.........420..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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