Job Description P52095 Confidence 93.46% Date Thu Jan 5 12:05:15 GMT 2012 Rank 302 Aligned Residues 110 % Identity 14% Template c1r8jB_ PDB info PDB header:circadian clock protein Chain: B: PDB Molecule:kaia; PDBTitle: crystal structure of circadian clock protein kaia from2 synechococcus elongatus Resolution 2.03 Å

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		10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure														.																															.															.
Query SS confidence														.																															.															.
Query Sequence		H	G	V	F	Y	K	D	E	P	I	K	E	.	L	E	S	A	L	V	A	Q	G	F	Q	I	I	W	P	Q	N	S	V	D	L	L	K	F	I	E	H	N	P	R	.	I	C	G	V	I	F	D	W	D	E	Y	S	L	D	.	L	C	S	D	I	N	Q	L	N	E	Y	L	P	L	Y	A	F	I	N	T	H
Query Conservation														.																															.															.
Alig confidence														.																															.															.
Template Conservation
Template Sequence		I	C	I	W	V	E	S	T	A	I	L	Q	D	C	Q	R	A	L	S	A	D	R	Y	Q	L	Q	V	C	E	S	G	E	M	L	L	E	Y	A	Q	T	H	R	D	Q	I	D	C	L	I	L	V	A	A	N	P	S	F	R	A	V	V	Q	Q	L	C	F	E	G	V	V	V	P	A	I	V	V	G	D	P	A
Template Known Secondary structure																			T		S	T	T								S											S	T	T	S		S						T	T	S	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	M	D	V	S	V	Q	D	M	R	M	A	L	W	F	F	E	Y	A	L	G	Q	A	E	D	I	A	I	R	M	R	Q	Y	T	D	E	Y	L	D
Query Conservation
Alig confidence											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		K	E	Q	L	Y	H	S	A	E	.	.	.	.	.	.	.	L	H	L	G	I	H	Q	L	E	Q	L	P	Y	Q	V	D	A	A	L	A	E	F	L	R
Template Known Secondary structure			S		S	S	B	T	T		.	.	.	.	.	.	.					T	T	S		T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions