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Job DescriptionP52095
Confidence99.67%DateThu Jan 5 12:05:15 GMT 2012
Rank114Aligned Residues291
% Identity13%Templatec1ibjC_
PDB info PDB header:lyaseChain: C: PDB Molecule:cystathionine beta-lyase; PDBTitle: crystal structure of cystathionine beta-lyase from arabidopsis2 thaliana
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   198.200.........210.........220.........230.........240.........250.. .......260.........270...
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Query Sequence  LEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLIDRNCHKSLAHLL. . . . MMNDVVPVWLKPTRNALGILG
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Template Sequence  DALESLLAKLDKADRAFCFTSG. MAALSAVT. HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT. . . . . . . .
Template Known Secondary structure  T
SSS..TTS
TT
TT

TGGGGT

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   136...140.........150....... ..160..... ....170.........180.........190.........200.....
 
   274.....280.........290.........300...... ...310.........320...... ...330.........340.........350
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Query Sequence  GIPRREFTRDSIEEKVAATTQAQWPVHAVITNS. TYDGLLYNTDWIKQTLDVPS. . IHFDSAWVPYTHFHPIYQGKSGMS
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Template Sequence  . . . . . . . KLDEVAAAIGPQTKL. . . . . VWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRP. . . . . . . . .
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TTT

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   206...210.........220 .........230.........240.........250.........260....
 
   351........360.........370..... ....380.........390.........400.........410.........420........
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Query Sequence  GERVAGKVIFETQSTHKMLAALSQA. . SLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNPGKRLINRS
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Template Sequence  . . . LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSG. . . . . . LAPFDCWLCLRGIKTMALRIEKQ
Template Known Secondary structure  ...GGGT
STTTTTT
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SSTT
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   265....270.........280.........290.........300.........310.. .......320.........330.....
 
   429430.........440.........450.........460.........470.........480.........490.........500........
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Query Sequence  VERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDADADHMFLDPVKVTILTPGMDEQGNMSEEG
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Template Sequence  QENARKIAMYLSSHPRVK. . . . . . . . . . . . . . . . . . KVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS. . . . . . . . . . V
Template Known Secondary structure  T
TT

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   336...340.........350... ......360.........370.........380...... .
 
   509510.........520......... 530.........540.........550......
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Query Sequence  IPAALVAKFLDERGIVVEKTG. . . . . . . . . . . . . . . . . . . . . . . . . . . PYNLLFLFSIGIDKTKAMGLLRGLTEF
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Template Sequence  ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTF
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SSS
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SSS

TTTTTTTT

SSTTTTSS

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   388.390.........400.........410.........420.........430.........440.........450.........460..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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