 |
Job Description | P77473 | Confidence | 45.88% | Date | Thu Jan 5 12:29:36 GMT 2012 |
Rank | 283 | Aligned Residues | 93 |
% Identity | 12% | Template | d1rd5a_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 2.02 |
|
 |
  |   |
403 | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | |
. | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | |
|
|
|
. | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | |
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
K | T | S | A | P | I | I | S | R | Y | R | E | A | G | H | E | I | Y | . |
L | D | D | F | G | T | G | Y | S | S | L | S | Y | L | Q | D | L | D | V | D | I | L | K | I | D | K | S | F | V | D | A | L | E | Y | K | . |
. |
. |
. |
N | V | T | P | H | I | I | E | M | A | K | T | L | K | L | K | M | V | A | E | . |
G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   | . |
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
| . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
V | A | A | H | S | L | W | S | E | A | K | N | N | N | L | E | L | V | L | L | T | T | P | A | I | P | E | D | R | M | K | E | I | T | K | A | S | E | G | F | V | Y | L | V | S | V | N | G | V | T | G | P | R | A | N | V | N | P | R | V | E | S | L | I | Q | E | V | K | K | V | T | N | K | P | V | A | V | G | F | G |
Template Known Secondary structure |   |
T | T |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |
| S | S |
|
| B |
| T | T | S |
| B |
| T |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
  |
  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | T | S | K | Q | E | E | W | L | R | Q | H | G | V | H | Y | G | Q |
Query Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
I | S | K | P | E | H | V | K | Q | I | A | Q | W | G | A | D | G | V | I |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|