 |
Job Description | P77473 | Confidence | 24.89% | Date | Thu Jan 5 12:29:36 GMT 2012 |
Rank | 368 | Aligned Residues | 93 |
% Identity | 15% | Template | d1qapa1 |
SCOP info | TIM beta/alpha-barrel
| Nicotinate/Quinolinate PRTase C-terminal domain-like
| NadC C-terminal domain-like
|
Resolution | 2.80 |
|
 |
  |   |
405 | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | |
|
. | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | P | I | I | S | R | Y | R | E | A | G | H | E | I | Y | L | D | D | F | G | T | G | Y | S | S | L | S | Y | L | Q | D | L | D | V | D | I | L | K | I | D | K | S | F | V | D | A | L | E | Y | K | N | V | T | P | H | I | I | E | M | A | K | T | L | . |
. |
K | L | K | M | V | A | E | G | I | E | T | S | K | Q |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
| . | . |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |   |
|
Template Sequence |   |
V | R | Q | A | V | E | K | A | F | W | L | H | P | D | V | P | V | E | V | E | V | E | N | L | D | E | L | D | D | A | L | K | A | G | A | D | I | I | M | L | D | N | F | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
T | D | Q | M | R | E | A | V | K | R | V | N | G | Q | A | R | L | E | V | S | G | N | V | T | A | E | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S | T | T | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | S |
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|
|  |  |  |
|
|
| S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
  |
  |   |
483 | . | . | . | . | . | . | 490 | . | . | . | . | |
. | . | . | . | . | 500 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  | . |  |
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | E | W | L | R | Q | H | G | V | H | Y | G | . |
Q | G | W | L | Y | S | K | A | L | P | K | E |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   | . |
|
|   |   |   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|   |   |   |   |
|   |   |   |
|
Template Sequence |   |
L | R | E | F | A | E | T | G | V | D | F | I | S | V | G | A | L | T | K | H | V | R | A | L | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| S |  |  |  |
| S |  |  |  |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
266 | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|