Return to main results Retrieve Phyre Job Id

Job DescriptionP77473
Confidence85.82%DateThu Jan 5 12:29:36 GMT 2012
Rank107Aligned Residues47
% Identity21%Templated1hvxa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   431........440.........450 .........460.........470.......
Predicted Secondary structure 




...........................







Query SS confidence 



















. . . . . . . . . . . . . . . . . . . . . . . . . . .


























Query Sequence  LSYLQDLDVDILKIDKSFVD. . . . . . . . . . . . . . . . . . . . . . . . . . . ALEYKNVTPHIIEMAKTLKLKMVAEGI
Query Conservation 
  
  
  
 



   
 ........................... 
        
   
  
   





Alig confidence 



















...........................


























Template Conservation 




 


 






         

      
         

   

  

  

  

  

 



 
Template Sequence  ANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVV
Template Known Secondary structure  TT




SSSTT

SSSTT
SS
S
BTTBSS
SS

TT

Template Predicted Secondary structure 











































Template SS confidence 









































































   30.........40.........50.........60.........70.........80.........90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions