Return to main results Retrieve Phyre Job Id

Job DescriptionP77473
Confidence56.24%DateThu Jan 5 12:29:36 GMT 2012
Rank251Aligned Residues108
% Identity19%Templatec3snkA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator chey-like protein; PDBTitle: crystal structure of a response regulator chey-like protein (mll6475)2 from mesorhizobium loti at 2.02 a resolution
Resolution2.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420.........430.........440.........450.........460.........470.........480
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGIETS
Query Conservation             
   
  
 




    

  
  
  
 



   
  
        
   
  
   






  
Alig confidence 
















.
































.

















.








Template Conservation 
      
   
     .  
                  



 
  
   . 
      
       

.
 

     
Template Sequence  DPNFKRDVATRLDALAI. YDVRVSETDDFLKGPPADTRPGIVILDLGGGDL. LGKPGIVEARALWATVPL. IAVSDELTS
Template Known Secondary structure 
TSS.
GGGGGG


TT


STTGG.GGSTTGGGTT

.S


Template Predicted Secondary structure 
.



















.

















.








Template SS confidence 















































































   22.......30........ .40.........50.........60.........70. ........80......... 90........
 
   481........490.........500.........510.....
Predicted Secondary structure 













Query SS confidence 


































Query Sequence  KQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQH
Query Conservation       
   
    

     
             
Alig confidence 












....

















Template Conservation           

 
.... 
 

    

   
   
Template Sequence  EQTRVLVRXNASD. . . . WLHKPLDGKELLNAVTFH
Template Known Secondary structure  TT
S....SS

T
Template Predicted Secondary structure 








....




Template SS confidence 


































   99100.........110. ........120.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions