Job Description P77473 Confidence 47.49% Date Thu Jan 5 12:29:36 GMT 2012 Rank 278 Aligned Residues 108 % Identity 10% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

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		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	A	D	P	K	T	S	A	P	I	I	S	R	Y	R	E	A	G	H	E	I	Y	L	D	D	F	G	T	G	Y	S	S	L	S	Y	L	Q	D	L	D	V	D	I	L	K	I	D	K	S	F	V	D	A	L	E	Y	K	N	V	T	P	H	I	I	E	M	A	K	T	L	K	L	K	M	V	A	E	G	I
Query Conservation
Alig confidence																										.	.																							.		.																							.
Template Conservation																										.	.																							.		.																							.
Template Sequence		V	D	D	E	A	N	I	V	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	.	.	A	T	N	G	A	Q	A	L	D	R	A	R	E	T	R	P	D	A	V	I	L	D	.	V	.	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A	D	G	I	D	A	P	A	.	L	F	L	T	A	R
Template Known Secondary structure				S															T	T						.	.		S	S														S						.		.			S	S												T	T						.						S
Template Predicted Secondary structure																										.	.																							.		.																							.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	S	K	Q	E	E	W	L	R	Q	H	G	V	H	Y	G	Q	G	W	L	Y	S	K	A	L	P	K	E	D	F	L	R	W	A	E	Q
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		D	S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	.	.	.	.	V	T	K	P	F	S	L	E	E	V	V	A	R	L	R	V
Template Known Secondary structure		T	T									T	S	T	T				.	.	.	.			S	S
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions