Return to main results Retrieve Phyre Job Id

Job DescriptionP77473
Confidence51.63%DateThu Jan 5 12:29:36 GMT 2012
Rank265Aligned Residues110
% Identity17%Templatec3n0rA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator; PDBTitle: structure of the phyr stress response regulator at 1.25 angstrom2 resolution
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   398.400.........410.........420.........430.........440.........450.........460.........470.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  EFADPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVAEGI
Query Conservation                
   
  
 




    

  
  
  
 



   
  
        
   
  
   





Alig confidence 





















.










































...










Template Conservation 


           
   
  
.   
     
           

 
   
    
         ...    


  
 
Template Sequence  IEDEPVIAADIEALVRELGHDV. TDIAATRGEALEAVTRRTPGLVLADIQLADGSSGIDAVKDILG. . . RXDVPVIFITA
Template Known Secondary structure 

STT
.SS


SS

TTS

TTTTT...TT

S
Template Predicted Secondary structure 







.















...





Template SS confidence 















































































   146...150.........160....... ..170.........180.........190.........200.........210 .........220.
 
   478.480.........490.........500.........510......
Predicted Secondary structure 
















Query SS confidence 






































Query Sequence  ETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
Query Conservation 
       
   
    

     
              
Alig confidence 














.....


















Template Conservation                 ..... 
 

     
   
   
Template Sequence  FPERLLTGERPEPTF. . . . . LITKPFQPETVKAAIGQAL
Template Known Secondary structure 
GGGG

SSS


SS.....SS

Template Predicted Secondary structure 





.....



Template SS confidence 






































   222.......230...... ...240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions