Return to main results Retrieve Phyre Job Id

Job DescriptionP77473
Confidence62.44%DateThu Jan 5 12:29:36 GMT 2012
Rank234Aligned Residues91
% Identity18%Templatec3kruC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   405....410.... .....420.........430........ .440.........450...... ...460.......
Predicted Secondary structure  .......













......





....
Query SS confidence 









. . . . . . .























. . . . . .

















. . . .










Query Sequence  SAPIISRYRE. . . . . . . AGHEIYLDDFGTGYSSLSYLQDLD. . . . . . VDILKIDKSFVDALEYKN. . . . VTPHIIEMAKT
Query Conservation         
  ....... 
  
 




    

  
  
 ...... 
 



   
  
    ....    
   
  
Alig confidence 









.......























......

















....










Template Conservation    


 


 


 
  
 


   
    
   

       
  


 
 

 
                    

  
Template Sequence  LIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKR
Template Known Secondary structure  TS
TTS



SSTTS

TTT
S


SS






TTTT
Template Predicted Secondary structure 
































Template SS confidence 















































































   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   468.470...... ...480.........490 .....
Predicted Secondary structure 



.




.

Query SS confidence 








.













.




Query Sequence  LKLKMVAEG. IETSKQEEWLRQHG. VHYGQ
Query Conservation 
   




.

       
   
.    
Alig confidence 








.













.




Template Conservation    



  


   
 
   
  
  
 
 
Template Sequence  CNIKTSAVGLITTQELAEEILSNERADLVA
Template Known Secondary structure  T

SS


TTS
S
Template Predicted Secondary structure 













Template SS confidence 





























   276...280.........290.........300.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions