Return to main results Retrieve Phyre Job Id

Job DescriptionP77473
Confidence93.12%DateThu Jan 5 12:29:36 GMT 2012
Rank44Aligned Residues114
% Identity12%Templatec3gl9B_
PDB info PDB header:signaling proteinChain: B: PDB Molecule:response regulator; PDBTitle: the structure of a histidine kinase-response regulator2 complex sheds light into two-component signaling and3 reveals a novel cis autophosphorylation mechanism
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   395....400 .........410.........420.........430.........440.........450.........460.........470
Predicted Secondary structure 





...























.
Query SS confidence 





. . .





































































.
Query Sequence  TEREFA. . . DPKTSAPIISRYREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKL.
Query Conservation   
    ...           
   
  
 




    

  
  
  
 



   
  
        
   
  
  .
Alig confidence 





...

















..
























..






















.
Template Conservation 
 






       
   
   
  ..
       

         
 

  ..      
      

         
Template Sequence  SKKVLLVDDSAVLRKIVSFNLKKEGYE. . VIEAENGQIALEKLSEFTPDLIVLI. . MMPVMDGFTVLKKLQEKEEWKRIP
Template Known Secondary structure 


S
TT
..SSTT


S

..

SSS

TTTTTS
Template Predicted Secondary structure 







..











..













Template SS confidence 















































































   2.......10.........20........ .30.........40.........50... ......60.........70.......
 
   471........480.........490.........500.........510......
Predicted Secondary structure 


















Query SS confidence 













































Query Sequence  KMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL
Query Conservation   






       
   
    

     
              
Alig confidence 






















....


















Template Conservation 

  
              
   .... 
 

     
   
   
Template Sequence  VIVLTAKGGEEDESLALSLGARK. . . . VMRKPFSPSQFIEEVKHLL
Template Known Secondary structure  S

STT
S....SS

Template Predicted Secondary structure 









....



Template SS confidence 













































   7980.........90.........100. ........110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions