Job Description P77473 Confidence 100.00% Date Thu Jan 5 12:29:36 GMT 2012 Rank 2 Aligned Residues 358 % Identity 17% Template c3gfzB_ PDB info PDB header:hydrolase, signaling protein Chain: B: PDB Molecule:klebsiella pneumoniae blrp1; PDBTitle: klebsiella pneumoniae blrp1 ph 6 manganese/cy-digmp complex Resolution 2.05 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.
Predicted Secondary structure																					.	.	.	.																																													.	.	.	.	.
Query SS confidence																					.	.	.	.																																													.	.	.	.	.
Query Sequence		N	V	P	Q	C	S	S	L	E	H	E	S	P	P	D	T	F	P	E	.	.	.	.	P	G	K	I	S	K	D	G	Y	R	V	W	L	T	S	H	N	D	L	G	I	I	R	Y	M	V	A	M	G	T	A	H	Y	V	V	M	I	D	P	A	S	F	I	D	.	.	.	.	.	V	I	P	Y	S	S	W	Q
Query Conservation																					.	.	.	.																																													.	.	.	.	.
Alig confidence																					.	.	.	.																									.	.																			.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		Y	R	S	Q	V	H	P	D	R	P	P	V	D	L	D	A	L	V	H	R	A	S	S	K	N	L	P	L	G	I	T	G	I	L	L	F	N	G	L	Q	F	F	Q	V	L	E	G	.	.	T	E	E	A	L	E	S	L	F	S	E	I	Q	S	D	P	R	H	R	D	V	V	E	L	M	R	D	Y	S	A	Y
Template Known Secondary structure								T	T	S																				T									S	S									.	.														T		T	T													S	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	A	I	I	G	N	A	H	N	V	V	I	T	S	S	D	E	I	A	Q	G	I	I	T	R	L	Q	K	T	P	G	E	H	I	E	N	N	G	I	I	Y	D	I	L	P	L	P	E	M	N	I	S	I	I	T	W	A	S	T	K	M	L	Q	K	G	W	H	R	Q	V	F	I	W	L	P	L	G	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	F	H	G	T	G	M	R	I	L	D	L	R	L	F	E	T	D	G	A	L	E	E	I	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	T	F	G	V	T	E	P	V	N	D	R	M	F	R	L	L	S	A	F	I	A	D	G
Template Known Secondary structure			S			S	S	S						G	G	G			T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S		G	G	G	S													G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																													.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		V	I	G	L	L	A	A	M	F	V	L	R	I	L	R	R	I	Q	S	P	H	H	R	L	Q	D	A	I	E	N	R	D	I	C	V	H	Y	Q	P	I	V	S	L	A	N	G	K	I	V	G	A	E	A	L	A	R	W	P	Q	T	D	G	.	S	W	L	S	P	D	S	F	I	P	L	A	Q	Q	T	G	L
Query Conservation																																																																.
Alig confidence												.	.	.	.	.	.																																															.
Template Conservation												.	.	.	.	.	.
Template Sequence		G	R	Y	C	L	P	E	P	L	Q	.	.	.	.	.	.	P	S	R	W	M	M	M	A	P	Q	H	L	P	G	Q	P	C	Q	F	A	L	Q	A	I	V	E	P	A	K	K	R	V	S	S	F	E	A	L	I	R	S	P	T	G	G	S	P	V	E	M	F	A	A	I	A	A	E	D	R	Y	R	F	D	L
Template Known Secondary structure		G	G	G				G	G	G		.	.	.	.	.	.	G	G	G										T	T	S	S											T	T	T	T												T	T	S									T	S		G	G	G
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.																															.
Query SS confidence																																							.																															.
Query Sequence		S	E	P	L	T	L	L	I	I	R	S	V	F	E	D	M	G	D	W	L	R	Q	H	P	Q	Q	H	I	S	I	N	L	E	S	P	V	L	.	T	S	E	K	I	P	Q	L	L	R	D	M	I	N	H	Y	Q	V	N	P	R	Q	I	A	L	E	L	T	E	R	.	E	F	A	D	P	K	T	S	A	P	I
Query Conservation																																							.																															.
Alig confidence															.	.	.	.	.	.	.	.																	.																															.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		E	S	K	A	Y	A	F	A	L	A	G	Q	L	.	.	.	.	.	.	.	.	P	L	G	K	H	Q	L	A	I	N	L	L	P	G	S	L	Y	H	H	P	D	A	V	G	W	L	M	D	S	L	L	A	A	G	L	R	P	D	Q	V	L	I	E	V	T	E	T	E	V	I	T	C	F	D	Q	F	R	K	V
Template Known Secondary structure			T											T	.	.	.	.	.	.	.	.	T			S														S	S	S	S												T	T			G	G	G												T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.									230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.					.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		I	S	R	Y	R	E	A	G	H	E	I	Y	L	D	D	F	G	T	G	Y	S	S	L	S	Y	L	Q	D	L	D	V	D	I	L	K	I	D	K	S	F	V	D	A	L	E	Y	K	N	.	.	.	.	V	T	P	H	I	I	E	M	A	K	T	L	K	L	K	M	V	A	E	G	I	E	T	S	K	Q	E	E
Query Conservation																																																		.	.	.	.
Alig confidence																																																		.	.	.	.
Template Conservation
Template Sequence		L	K	A	L	R	V	A	G	M	K	L	A	I	D	D	F	G	A	G	Y	S	G	L	S	L	L	T	R	F	Q	P	D	K	I	K	V	D	A	E	L	V	R	D	I	H	I	S	G	T	K	Q	A	I	V	A	S	V	V	R	C	C	E	D	L	G	I	T	V	V	A	E	G	V	E	T	L	E	E	W	C
Template Known Secondary structure									T									T	S	S	S			S	T								S										T	T	G	G	G	B																		T										S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	R	Q	H	G	V	H	Y	G	Q	G	W	L	Y	S	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	L	Q	S	V	G	I	R	L	F	Q	G	F	L	F	S	R	P
Template Known Secondary structure						T	T						S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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