Job Description P77473 Confidence 99.55% Date Thu Jan 5 12:29:36 GMT 2012 Rank 12 Aligned Residues 190 % Identity 5% Template c3ezuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef domain protein; PDBTitle: crystal structure of multidomain protein of unknown function with2 ggdef-domain (np_951600.1) from geobacter sulfurreducens at 1.95 a3 resolution Resolution 1.95 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		Q	G	K	D	A	L	Q	E	L	E	R	W	Q	G	A	A	C	S	E	A	H	L	M	E	M	R	R	V	S	Y	S	Y	R	Y	I	Q	E	V	A	Y	I	D	N	N	V	P	Q	C	S	S	L	E	H	E	S	P	P	D	T	F	P	E	P	G	K	I	S	.	.	.	.	K	D	G	Y	R	V	W	L	T
Query Conservation																																																																					.	.	.	.
Alig confidence																																																																					.	.	.	.
Template Conservation
Template Sequence		Y	G	R	Y	L	R	R	F	I	D	G	I	G	S	C	G	L	A	T	A	E	T	E	L	L	G	E	A	L	F	R	L	W	N	E	A	R	Q	L	A	A	Q	S	H	F	D	A	L	T	G	V	X	T	R	A	G	F	F	K	T	V	G	S	L	A	Y	A	A	Q	R	S	G	S	N	V	G	I	X	L	I
Template Known Secondary structure												T	T	T		S	S																													B		T	T	T		S	B																				T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	N	D	L	G	I	I	R	Y	M	V	A	M	G	T	A	H	Y	V	V	M	I	D	P	A	S	F	I	D	V	I	P	Y	S	S	W	Q	I	D	A	A	I	I	G	N	A	H	N	V	V	I	T	S	S	D	E	I	A	Q	G	I	I	T	R	L	Q	K	T	P	G	E	H	I	E	N	N	G	I	I
Query Conservation
Alig confidence													.	.	.	.	.																																						.																					.	.	.
Template Conservation													.	.	.	.	.																																						.																					.	.	.
Template Sequence		D	L	D	Y	F	K	L	V	G	Q	T	.	.	.	.	.	G	D	R	I	L	Q	L	V	A	E	T	I	T	S	H	L	R	R	S	D	V	V	G	R	Y	D	G	D	E	F	V	V	Y	L	S	P	V	.	E	P	A	S	L	R	T	V	A	E	N	L	R	R	S	I	E	E	E	S	.	.	.	A	R	X
Template Known Secondary structure													.	.	.	.	.															T			T	T							S	S	S							S	S		.																				T	.	.	.	T	T	T
Template Predicted Secondary structure													.	.	.	.	.																																						.																					.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.
		214	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		Y	D	I	L	P	L	P	E	M	N	.	.	.	I	S	I	I	T	W	A	S	T	K	M	L	Q	K	G	W	H	R	Q	V	F	I	W	L	P	L	G	L	V	I	G	L	L
Query Conservation												.	.	.
Alig confidence												.	.	.
Template Conservation
Template Sequence		V	P	V	T	A	S	I	G	V	A	Q	G	I	L	G	T	D	V	D	G	G	I	E	E	L	V	R	L	A	D	E	C	L	X	Q	A	K	Y	T	G	K	N	K	V	V	V
Template Known Secondary structure																	S																							S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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