Job Description P77473 Confidence 99.35% Date Thu Jan 5 12:29:36 GMT 2012 Rank 16 Aligned Residues 201 % Identity 8% Template c3breA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: crystal structure of p.aeruginosa pa3702 Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		G	K	D	A	L	Q	E	L	E	R	W	Q	G	A	A	C	S	E	A	H	L	M	E	M	R	R	V	S	Y	S	Y	R	Y	I	Q	E	V	A	Y	I	D	N	N	V	P	Q	C	S	S	L	E	H	E	S	P	P	D	T	F	P	E	P	G	K	I	S	.	.	.	.	K	D	G	Y	R	V	W	L	T	S
Query Conservation																																																																				.	.	.	.
Alig confidence																																																																				.	.	.	.
Template Conservation
Template Sequence		V	A	R	I	R	Y	H	S	R	S	Y	I	A	L	Q	Q	R	D	E	A	Y	R	A	L	R	E	S	Q	Q	Q	L	L	E	T	N	L	V	L	Q	R	L	M	N	S	D	G	L	T	G	L	S	N	R	R	H	F	D	E	Y	L	E	M	E	W	R	R	S	L	R	E	Q	S	Q	L	S	L	L	M	I	D
Template Known Secondary structure																																													B		T	T	T		S	B																				T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		H	N	D	L	G	I	I	R	Y	M	V	A	M	G	T	A	H	Y	V	V	M	I	D	P	A	S	F	I	D	V	I	P	Y	S	S	W	Q	I	D	A	A	I	I	G	N	A	H	N	V	V	I	T	S	S	D	E	I	A	Q	G	I	I	T	R	L	Q	K	T	P	G	E	.	.	.	H	I	E	N	N	G
Query Conservation																																																																									.	.	.
Alig confidence																																																																									.	.	.
Template Conservation
Template Sequence		V	D	Y	F	K	S	Y	N	D	T	F	G	H	V	A	G	D	E	A	L	R	Q	V	A	G	A	I	R	E	G	C	S	R	S	S	D	L	A	A	R	Y	G	G	E	E	F	A	M	V	L	P	G	T	S	P	G	G	A	R	L	L	A	E	K	V	R	R	T	V	E	S	L	Q	I	S	H	D	Q	P	R
Template Known Secondary structure			T	T																										T	T			S	T	T								T	T								T																			T	T					S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		I	I	Y	D	I	L	P	L	P	E	M	N	I	S	.	.	I	I	T	W	A	S	T	K	M	L	Q	K	G	W	H	R	Q	V	F	I	W	L	P	L	G	L	V	I	G	L	L	A	A	M
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		P	G	S	H	L	T	V	S	I	G	V	S	T	L	V	P	G	G	G	G	Q	T	F	R	V	L	I	E	M	A	D	Q	A	L	Y	Q	A	K	N	N	G	R	N	Q	V	G	L	M	E	Q
Template Known Secondary structure		T	T																S	S	S			T																T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions