Return to main results Retrieve Phyre Job Id

Job DescriptionP77473
Confidence78.73%DateThu Jan 5 12:29:36 GMT 2012
Rank166Aligned Residues65
% Identity15%Templatec2wcsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde)
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   401........410.........420. ........430.........440.........450.........460.........470....
Predicted Secondary structure 



......




















Query SS confidence 




















. . . . . .




















































Query Sequence  DPKTSAPIISRYREAGHEIYL. . . . . . DDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLKLKMVA
Query Conservation             
   
  
 
......



    

  
  
  
 



   
  
        
   
  
   


Alig confidence 




















......







........










....





















Template Conservation 
  

   



  


  
 
 

       

 ........  
   

   ....

  


 

  

  

 


Template Sequence  DLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYH. . . . . . . . THDYYQVDPML. . . . GGNEAFKELLDAAHQRNIKVVL
Template Known Secondary structure 
TT

S

STT
TTS........
GGG....TTT
Template Predicted Secondary structure 

















........










....




Template SS confidence 















































































   54.....60.........70.........80........ .90......... 100.........110.........120.
 
   475..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  EGI
Query Conservation 


Alig confidence 


Template Conservation 


Template Sequence  DGV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   122..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions