Job Description P77473 Confidence 85.45% Date Thu Jan 5 12:29:36 GMT 2012 Rank 109 Aligned Residues 107 % Identity 12% Template c2qzjC_ PDB info PDB header:transcription Chain: C: PDB Molecule:two-component response regulator; PDBTitle: crystal structure of a two-component response regulator from2 clostridium difficile Resolution 2.89 Å

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		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	K	T	S	A	P	I	I	S	R	Y	R	E	A	G	H	E	I	Y	L	D	D	F	G	T	G	Y	S	S	L	S	Y	L	Q	D	L	D	V	D	I	L	K	I	D	K	S	F	V	D	A	L	E	Y	K	N	V	T	P	H	I	I	E	M	A	K	T	L	K	L	K	M	V	A	E	G	I	E	T	S
Query Conservation
Alig confidence																				.	.																													.															.	.
Template Conservation																				.	.																													.															.	.
Template Sequence		D	K	D	N	C	Q	K	L	K	G	F	L	E	E	K	G	I	S	.	.	I	D	L	A	Y	N	C	E	E	A	I	G	K	I	F	S	N	K	Y	D	L	I	F	L	E	I	I	L	.	S	D	G	D	G	W	T	L	C	K	K	I	R	N	.	.	V	T	T	C	P	I	V	Y	X	T	Y	I	N	E	D
Template Known Secondary structure																T	T			.	.						S										T				S						S			.	T	T													.	.				S							S
Template Predicted Secondary structure																				.	.																													.															.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	E	E	W	L	R	Q	H	G	V	H	Y	G	Q	G	W	L	Y	S	K	A	L	P	K	E	D	F	L	R	W	A	E	Q	H	L
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		Q	S	I	L	N	A	L	N	S	G	G	D	D	.	.	.	.	Y	L	I	K	P	L	N	L	E	I	L	Y	A	K	V	K	A	I	L
Template Known Secondary structure										T	T		S		.	.	.	.				S	S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions