Job Description P77473 Confidence 92.25% Date Thu Jan 5 12:29:36 GMT 2012 Rank 55 Aligned Residues 112 % Identity 12% Template c2jk1A_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain Resolution 2.10 Å

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		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	A	D	P	K	T	S	A	P	I	I	S	R	Y	R	E	A	G	H	E	I	Y	L	D	D	F	G	T	G	Y	S	S	L	S	Y	L	Q	D	L	D	V	D	I	L	K	I	D	K	S	F	V	D	A	L	E	Y	K	N	V	T	P	H	I	I	E	M	A	K	T	L	K	L	K	M	V	A	E	G	I
Query Conservation
Alig confidence																							.	.																													.
Template Conservation																							.	.																													.
Template Sequence		L	V	D	D	E	P	H	S	L	A	A	M	K	L	A	L	E	D	D	F	D	.	.	V	L	T	A	Q	G	A	E	A	A	I	A	I	L	E	E	E	W	V	Q	V	I	I	C	D	Q	R	M	.	P	G	R	T	G	V	D	F	L	T	E	V	R	E	R	W	P	E	T	V	R	I	I	I	T	G	Y	T
Template Known Secondary structure					S	S												T	T	T	S		.	.					S	S											S									S			.	S	S	S														T	T	S							S		T
Template Predicted Secondary structure																							.	.																													.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	S	K	Q	E	E	W	L	R	Q	H	G	V	H	Y	G	Q	G	W	L	Y	S	K	A	L	P	K	E	D	F	L	R	W	A	E	Q	H	L
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		D	S	A	S	M	M	A	A	I	N	D	A	G	I	H	.	.	.	.	Q	F	L	T	K	P	W	H	P	E	Q	L	L	S	S	A	R	N	A	A
Template Known Secondary structure		T											T	T			.	.	.	.					S	S
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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