 |
Job Description | P77473 | Confidence | 36.97% | Date | Thu Jan 5 12:29:36 GMT 2012 |
Rank | 303 | Aligned Residues | 88 |
% Identity | 10% | Template | c1o4uA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:type ii quinolic acid phosphoribosyltransferase; |
PDBTitle: crystal structure of a nicotinate nucleotide pyrophosphorylase2 (tm1645) from thermotoga maritima at 2.50 a resolution
|
Resolution | 2.50 Å |
|
 |
  |   |
401 | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | P | K | T | S | A | P | I | I | S | R | Y | R | E | A | G | H | E | I | Y | L | D | D | F | G | T | G | Y | S | S | L | S | Y | L | Q | D | L | D | V | D | I | L | K | I | D | K | S | F | V | D | A | L | E | Y | K | N | V | T | P | H | I | I | E | M | A | K | T | L | K | L | K | M | V | A | E | G | I | E | T | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
| . | . |
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
| . | . |   |   |   |   |   |   |
|   |   |   |   | . | . |   |   |
|   |
|   |
|
|
|
|
|   |   |
Template Sequence |   |
S | A | E | R | A | V | Q | E | V | R | K | I | I | P | F | T | T | K | I | E | V | E | . |
. |
V | E | N | L | E | D | A | L | R | A | V | E | A | G | A | D | I | V | M | L | D | N | L | S | P | E | E | V | . |
. |
K | D | I | S | R | R | I | K | D | I | N | . |
. |
P | N | V | I | V | E | V | S | G | G | I | T | E |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |
|  |  |  |  | . | . |  | S | S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | S |
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
| . | . | T | T | S |  |  |  |  |  |  |
|
|
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
166 | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | |
|
. | . | . | . | 220 | . | . | . | . | . | . | |
|
. | . | . | 230 | . | . | . | . | . | . | . | . | . |
  |
  |   |
481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | E | E | W | L | R | Q | H | G | V | H | Y | G |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|
|   |
|
Template Sequence |   |
E | N | V | S | L | Y | D | F | E | T | V | D | V | I |
Template Known Secondary structure |   |
T | T | G | G | G | G |
|
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|