Job Description P77473 Confidence 49.07% Date Thu Jan 5 12:29:36 GMT 2012 Rank 275 Aligned Residues 67 % Identity 16% Template c1ktbA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: the structure of alpha-n-acetylgalactosaminidase Resolution 1.90 Å

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		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430																					.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	T	S	A	P	I	I	S	R	Y	R	E	A	G	H	E	I	Y	L	D	D	F	G	T	G	Y	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	Y	L	Q	D	L	D	V	D	I	L	K	I	D	K	S	F	V	D	A	L	E	Y	K	N	V	T	P	H	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		P	R	G	I	K	A	L	A	D	Y	V	H	A	R	G	L	K	L	G	I	.	.	.	.	.	.	Y	G	D	L	G	R	L	T	C	G	G	Y	P	G	T	T	L	D	R	V	E	Q	D	A	Q	T	F	A	E	W	G	V	D	M	L	K	L	D	G	C	Y	S	S	G	K	E	Q	A	Q	G	Y	P	Q	M
Template Known Secondary structure		T	T											T	T	T						.	.	.	.	.	.				B	S	S	B		T	T	S	S	B		B		G	G	G												T									T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	M	A	K	T	L	K	L	K	M	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	L	N	A	T	G	R	P	I	V	Y
Template Known Secondary structure								T	T	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions