 |
Job Description | P09832 | Confidence | 98.48% | Date | Thu Jan 5 11:02:29 GMT 2012 |
Rank | 266 | Aligned Residues | 59 |
% Identity | 20% | Template | c3cp8C_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:trna uridine 5-carboxymethylaminomethyl |
PDBTitle: crystal structure of gida from chlorobium tepidum
|
Resolution | 3.20 Å |
|
  |   |
148 | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | A | I | I | G | A | G | P | A | G | L | A | C | A | D | V | L | T | R | N | G | V | K | A | V | V | F | D | R | H | P | E | I | G | G | L | L | T | F | G | I | P | A | F | K | L | E | K | E | V | M | T | R | R | R | E | I | F |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|
Template Sequence |   |
D | V | I | V | V | G | A | G | H | A | G | C | E | A | A | L | A | V | A | R | G | G | L | H | C | L | L | I | T | S | D | L | S | A | V | A | R | M | S | C | N | P | A | I | G | G | V | A | K | G | Q | I | T | R | E | I | D | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S |
| G | G | G | T | T |
|
| S | S |
| S |  |  |  |
| T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|