Return to main results Retrieve Phyre Job Id

Job DescriptionP09832
Confidence99.95%DateThu Jan 5 11:02:29 GMT 2012
Rank66Aligned Residues291
% Identity18%Templatec3cgdB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:pyridine nucleotide-disulfide oxidoreductase, class i; PDBTitle: pyridine nucleotide complexes with bacillus anthracis coenzyme a-2 disulfide reductase: a structural analysis of dual nad(p)h3 specificity
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160......... 170.........180..... ....190.........200.........210.........220
Predicted Secondary structure 




..








.....











Query SS confidence 





















. .















. . . . .


































Query Sequence  KVAIIGAGPAGLACADVLTRNG. . VKAVVFDRHPEIGGLL. . . . . TFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTEVG
Query Conservation 














  
   
..  


 

    

 
.....  


                   

       
 
Alig confidence 





















..















.....


































Template Conservation 







 


 

  
   
    
 


     

                               

       
 
Template Sequence  NYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVT
Template Known Secondary structure 

S
TT

SSS

SB
GGGTTSSS
GGGGBSS
TT

SS
Template Predicted Secondary structure 


































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   221....... .230.........240.........250.........260.........270.........280.........290........
Predicted Secondary structure  ..














































Query SS confidence 







. .





































































Query Sequence  RDVQLDDL. . LSDYDAVFLGVGTYQSMRGGLENEDADGVYAALPFLIANTKQLMGFGETRDEPFVSMEGKRVVVLGGGDT
Query Conservation         
..    


    
                
  
                          
  






  
Alig confidence 







..





































































Template Conservation   
      
                                                                       
Template Sequence  KVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAI
Template Known Secondary structure  TTTTTTT


S







BTTTSBT

SSS




S
Template Predicted Secondary structure 




















































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   299300.........310........ .320.........330.........340.........350.........360.........370.....
Predicted Secondary structure 



...






















Query SS confidence 



















. . .
























































Query Sequence  AMDCVRTSVRQGAKHVTCAY. . . RRDEENMPGSRREVKNAREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAK
Query Conservation 
 
 
      
   
 

 ...
                  


          
       
  
             
Alig confidence 



















...









































...............
Template Conservation                                         
   

 
     
  
         ...............
Template Sequence  GLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAV. . . . . . . . . . . . . . .
Template Known Secondary structure  TT

SSSSSSTTS
TT

S


SSB

...............
Template Predicted Secondary structure 

























...............
Template SS confidence 















































































   162.......170.........180.........190.........200.........210.........220......
 
   376...380.........390.........400.........410.........420.........430.........440.......
Predicted Secondary structure 








































........
Query SS confidence 







































































. . . . . . . .
Query Sequence  GRRRAEIVAGSEHIVPADAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVR. . . . . . . .
Query Conservation 
        
    
 

 

 
 
  
    
    

     
 
           

 




 

 
 ........
Alig confidence  ........






















.
















....


















........
Template Conservation  ........         
 

 
 
  

  .            
 
 
....
    

   





 
         
Template Sequence  . . . . . . . . ETDKGTYKADLVLVSVGVKPNTD. FLEGTNIRTNHKGAIEV. . . . NAYMQTNVQDVYAAGDCATHYHVIKEI
Template Known Secondary structure  ........SS

S


S
G.GGTTS


B
TTS
B

....
TTSB
SSTT
GGGB
BTTT
S
Template Predicted Secondary structure  ........







.







....



















Template SS confidence 















































































   227..230.........240......... 250.........260...... ...270.........280.........290...
 
   448.450.........460......
Predicted Secondary structure  ..


Query SS confidence  . .


















Query Sequence  . . GSDLVVTAIAEGRKAADGI
Query Conservation  ..
   
  

  
  

  
Alig confidence  ..


















Template Conservation       

  
   
  

 

Template Sequence  HDHIPIGTTANKQGRLAGLNM
Template Known Secondary structure 



Template Predicted Secondary structure 





Template SS confidence 




















   294.....300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions