Job Description P09832 Confidence 99.26% Date Thu Jan 5 11:02:29 GMT 2012 Rank 153 Aligned Residues 105 % Identity 17% Template c2hkoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1 Resolution 2.80 Å

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		R	I	F	E	A	A	E	L	S	H	Q	T	N	T	L	P	E	V	C	G	R	V	C	P	Q	D	R	L	C	E	G	S	C	T	L	N	D	E	F	G	A	V	T	I	G	N	I	E	R	Y	I	N	D	K	A	F	E	M	G	W	R	.	.	P	D	M	S	G	V	K	Q	T	G	K	K	V	A	I	I	G
Query Conservation																																																															.	.
Alig confidence																					.	.	.	.	.	.																																					.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		F	I	R	N	R	T	L	Q	L	W	L	D	N	P	K	I	Q	L	T	.	.	.	.	.	.	F	E	A	T	L	Q	Q	L	E	A	P	Y	N	S	D	T	V	L	V	H	R	V	H	S	Y	L	E	R	H	G	L	I	N	F	G	I	Y	K	R	I	K	P	L	P	T	K	K	T	G	K	V	I	I	I	G
Template Known Secondary structure															T	T	B				.	.	.	.	.	.	T	T					T	S		T	T	T	T	T															T	T	S	S	S		S	S		B		S	S				S	S		S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	K	A	V	V	F	D	R	H	P	E	I	G	G	L	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	V	S	G	L	A	A	A	R	Q	L	Q	S	F	G	M	D	V	T	L	L	E	A	R	D	R	V	G	G	R	V	A
Template Known Secondary structure			B													T	T								S	S	S	S	S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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