Job Description P09832 Confidence 96.19% Date Thu Jan 5 11:02:29 GMT 2012 Rank 386 Aligned Residues 114 % Identity 18% Template c2h89B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.														.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.														.	.	.	.	.	.	.
Query Sequence		F	I	D	L	Q	R	V	D	P	P	K	K	P	L	K	I	R	K	I	E	F	V	E	I	Y	E	P	F	S	E	G	Q	A	K	A	Q	A	D	R	C	L	S	C	G	N	P	Y	C	E	W	K	C	P	V	.	.	.	.	.	.	H	N	Y	I	P	N	W	L	K	L	A	N	E	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.	.	.														.	.	.	.	.	.	.
Alig confidence																																															.	.								.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																																															.	.
Template Sequence		Y	A	Q	Y	K	S	I	E	P	Y	L	K	K	K	D	E	S	K	Q	G	K	E	Q	Y	L	Q	S	I	E	D	R	Q	K	L	D	G	L	Y	E	C	I	L	C	A	C	.	.	C	S	T	S	C	P	S	Y	W	W	N	G	D	K	Y	L	G	P	A	V	L	M	Q	A	Y	R	W	M	I	D	S	R	D
Template Known Secondary structure							T	T			S				S			T	T	T	T	S	S											T	T	T	T	T	T	T						T	.	.	T	G	G	G								T	T	T															S		T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	F	E	A	A	E	L	S	H	Q	T	N	T	L	P	E	V	C	G	R	V	C	P	Q	D	R	L	C	E	G	S	C	T	L	N	D	E	F	G	A	V	T	I	G	N	I	E	R	Y	I	N	D	K
Query Conservation
Alig confidence																				.	.	.	.	.															.
Template Conservation																				.	.	.	.	.															.
Template Sequence		D	Y	T	E	E	R	L	A	Q	L	Q	D	P	F	S	L	Y	R	.	.	.	.	.	C	H	T	I	M	N	C	T	R	T	C	P	K	G	.	L	N	P	G	K	A	I	A	E	I	K	K	M	M	A	T	Y
Template Known Secondary structure		S								T	T		S	T	T	T	T	T	T	.	.	.	.	.												T	T		.
Template Predicted Secondary structure																				.	.	.	.	.															.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions