Job Description P09832 Confidence 99.97% Date Thu Jan 5 11:02:29 GMT 2012 Rank 32 Aligned Residues 290 % Identity 20% Template c1nhqA_ PDB info PDB header:oxidoreductase (h2o2(a)) Chain: A: PDB Molecule:nadh peroxidase; PDBTitle: crystallographic analyses of nadh peroxidase cys42ala and cys42ser2 mutants: active site structure, mechanistic implications, and an3 unusual environment of arg303 Resolution 2.00 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																							.	.																		.	.	.	.
Query SS confidence																							.	.																		.	.	.	.
Query Sequence		K	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	.	.	G	V	K	A	V	V	F	D	R	H	P	E	I	G	G	L	L	.	.	.	.	T	F	G	I	P	A	F	K	L	E	K	E	V	M	T	R	R	R	E	I	F	T	G	M	G	I	E	F	K	L	N	T	E	V	G	R
Query Conservation																							.	.																		.	.	.	.
Alig confidence																							.	.																		.	.	.	.
Template Conservation
Template Sequence		K	V	I	V	L	G	S	S	H	G	G	Y	E	A	V	E	E	L	L	N	L	H	P	D	A	E	I	Q	W	Y	E	K	G	D	F	I	S	F	L	S	S	G	M	Q	L	Y	L	E	G	K	V	K	D	V	N	S	V	R	Y	M	T	G	E	K	M	E	S	R	G	V	N	V	F	S	N	T	E	I	T	A
Template Known Secondary structure								S	S															T	T	S							S	S	S	S	S	S	B		G	G	G						T	T	S	S			G	G	G	S	B	S									T	T						T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		222	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		D	V	Q	L	D	D	L	.	.	L	S	D	Y	D	A	V	F	L	G	V	G	T	Y	Q	S	M	R	G	G	L	E	N	E	D	A	D	G	V	Y	A	A	L	P	F	L	I	A	N	T	K	Q	L	M	G	F	G	E	T	R	D	E	P	F	V	S	M	E	G	K	R	V	V	V	L	G	G	G	D	T	A
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		I	Q	P	K	E	H	Q	V	T	V	K	D	L	V	S	G	E	E	R	V	E	N	Y	D	K	L	I	I	S	P	G	A	V	P	F	E	L	D	I	P	G	K	D	L	D	N	I	Y	L	M	R	G	R	Q	W	A	I	K	L	K	Q	K	T	V	D	P	E	V	N	N	V	V	V	I	G	S	G	Y	I	G
Template Known Secondary structure				T	T	T	T							T	T	T									S															S	T	T	T	T		B	T					S													T		T	T										S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		M	D	C	V	R	T	S	V	R	Q	G	A	K	H	V	T	C	A	Y	R	R	D	.	.	.	.	E	E	N	M	P	G	S	R	R	E	V	K	N	A	R	E	E	G	V	E	F	K	F	N	V	Q	P	L	G	I	E	V	N	G	N	G	K	V	S	G	V	K	M	V	R	T	E	M	G	E	P	D	A	K
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	A	A	E	A	F	A	K	A	G	K	K	V	T	V	I	D	I	L	D	R	P	L	G	V	Y	L	D	K	E	F	T	D	V	L	T	E	E	M	E	A	N	N	I	T	I	A	T	G	E	T	V	E	R	Y	E	G	D	G	R	V	Q	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T								S	S	S	S	T	T	T	T	T																T	T						S									S	S	B					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		G	R	R	R	A	E	I	V	A	G	S	E	H	I	V	P	A	D	A	V	I	M	A	F	G	F	R	P	H	N	M	E	W	L	A	K	H	S	V	E	L	D	S	Q	G	R	I	I	A	P	E	G	S	D	N	A	F	Q	T	S	N	P	K	I	F	A	G	G	D	I	V	R	G	S	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																										.	.															.	.	.	.																						.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																										.	.															.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	T	D	K	N	A	Y	D	A	D	L	V	V	V	A	V	G	V	R	P	N	T	A	W	L	.	.	K	G	T	L	E	L	H	P	N	G	L	I	K	T	.	.	.	.	D	E	Y	M	R	T	S	E	P	D	V	F	A	V	G	D	A	T	L	I	K	Y	N	P	A	D	T
Template Known Secondary structure		.	.	.	.	.	.	.	.			S	S						S						S					S		G	G	G	.	.	T	T	T	S		B		T	T	S		B			.	.	.	.		T	T		B		S	S	T	T					G	G	G	B					G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																										.	.															.	.	.	.
Template SS confidence
										227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
						450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	D	L	V	V	T	A	I	A	E	G	R	K	A	A	D	G	I
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		E	V	N	I	A	L	A	T	N	A	R	K	Q	G	R	F	A	V	K	N	L
Template Known Secondary structure																					T	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions