Job Description P09832 Confidence 99.96% Date Thu Jan 5 11:02:29 GMT 2012 Rank 57 Aligned Residues 303 % Identity 19% Template c1dxlC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase of glycine decarboxylase2 from pisum sativum Resolution 3.15 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																														.	190	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	G	K	K	V	A	I	I	G	A	G	P	A	G	L	A	C	A	D	V	L	T	R	N	G	V	K	A	V	V	F	D	R	H	P	E	I	G	G	L	L	T	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	A	F	K	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	E	N	D	V	V	I	I	G	G	G	P	G	G	Y	V	A	A	I	K	A	A	Q	L	G	F	K	T	T	C	I	E	K	R	G	A	L	G	G	T	C	L	N	V	G	C	I	P	S	K	A	L	L	H	S	S	H	M	Y	H	E	A	K	H	S	F	A	N	H	G	V	K	V	S	N	V	E	I	D
Template Known Secondary structure				B		S							S														T									S	S	S	S	S							S																				T									S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		E	K	E	V	M	T	R	R	R	E	I	F	T	G	M	G	I	E	F	K	L	N	T	E	V	G	R	D	V	Q	L	D	D	L	L	S	D	Y	D	A	V	F	L	G	V	G	T	Y	Q	S	M	R	G	G	L	E	N	E	D	A	D	G	V	Y	A	A	L	.	P	F	L	I	A	N	T	K	Q	L	M	G
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		L	A	A	M	M	G	Q	K	D	K	A	V	S	N	L	T	R	G	I	E	G	L	F	K	K	N	K	V	T	Y	V	K	G	Y	G	K	F	V	S	P	S	E	I	S	V	D	T	I	E	G	E	N	T	V	V	K	G	K	H	I	I	I	A	T	G	S	D	V	K	S	L	P	G	V	T	I	D	E	K	K
Template Known Secondary structure																												T						S					S	S	S	S						B	T	T	T	B							S														S	S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		F	G	E	T	R	D	E	P	F	V	S	M	E	G	K	R	V	V	V	L	G	G	G	D	T	A	M	D	C	V	R	T	S	V	R	Q	G	A	K	H	V	T	C	.	.	.	A	Y	R	R	D	E	E	N	M	P	G	S	R	R	E	V	K	N	A	R	E	E	G	V	E	F	K	F	N	V	Q	P	L	G
Query Conservation																																													.	.	.
Alig confidence																																													.	.	.
Template Conservation
Template Sequence		I	V	S	S	T	G	A	L	A	L	S	E	I	P	K	K	L	V	V	I	G	A	G	Y	I	G	L	E	M	G	S	V	W	G	R	I	G	S	E	V	T	V	V	E	F	A	S	E	I	V	P	T	M	D	A	E	I	R	K	Q	F	Q	R	S	L	E	K	Q	G	M	K	F	K	L	K	T	K	V	V	G
Template Known Secondary structure										T		S	S			S					S	S		S														T								S	S	S	S	S	S	S	S	S														T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		I	E	V	N	G	N	G	K	V	S	G	V	K	M	V	R	T	E	M	G	E	P	D	A	K	G	R	R	R	A	E	I	V	A	G	S	E	H	I	V	P	A	D	A	V	I	M	A	F	G	F	R	P	H	N	M	E	W	.	L	A	K	H	S	V	E	L	D	S	Q	G	R	I	I	A	P	E	G	S	D
Query Conservation																																																												.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Sequence		V	D	T	S	G	D	G	V	K	L	T	V	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	G	G	E	Q	T	I	I	E	A	D	V	V	L	V	S	A	G	R	T	P	F	T	S	G	L	N	L	D	K	I	G	V	E	T	D	K	L	G	R	I	L	V	.	.	.	.	N
Template Known Secondary structure			B		S	S	S	S		B			B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	S			B					S													T	T				T	T	T						T	T	S					.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.																		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.					.
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	F	Q	T	S	N	P	K	I	F	A	G	G	D	I	V	R	G	S	D	L	V	V	T	A	I	A	E	G	R	K	A	A	D	G	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	F	S	T	N	V	S	G	V	Y	A	I	G	D	V	I	P	G	P	M	L	A	H	K	A	E	E	D	G	V	A	C	V	E	Y	L	A
Template Known Secondary structure		T	T	S	B		S	S	T	T					S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions