Job Description P76469 Confidence 98.13% Date Thu Jan 5 12:23:13 GMT 2012 Rank 49 Aligned Residues 209 % Identity 17% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																														.	.	.	.																									.	.	.	.	.
Query SS confidence																														.	.	.	.																									.	.	.	.	.
Query Sequence		M	N	A	L	L	S	N	P	F	K	E	R	L	R	K	G	E	V	Q	I	G	L	W	L	S	S	T	T	.	.	.	.	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	.	.	.	.	.	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P
Query Conservation																														.	.	.	.																									.	.	.	.	.
Alig confidence															.	.	.	.												.	.	.	.																									.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		M	T	R	I	S	R	E	M	M	K	E	L	L	.	.	.	.	S	V	Y	F	I	M	G	S	N	N	T	K	A	D	P	V	T	V	V	Q	K	A	L	K	G	G	A	T	L	Y	Q	F	R	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A	E	K	A	Q	A	A	C	R	E	A	G	V	P	F
Template Known Secondary structure		S	S											T	.	.	.	.	T							G	G	G		S	S													T		S								S	T	T																						T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	R	P	V	E	G	S	K	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q
Query Conservation
Alig confidence				.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	.	.	.	.	.	.	N	D	D	V	E	L	A	L	N	L	K	A	D	G	I	H	I	G	Q	E	D	A	N	A	K	E	V	R	A	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	M	I	L	G	V	S
Template Known Secondary structure				.	.	.	.	.	.		S									T		S						T	T	S	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																																		.	.	.	.	.	.	.	130
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	A	V	.	A	P	D	M	A	Q	Q	C	L	A	W	G
Query Conservation																																																																					.
Alig confidence															.	.	.	.																																		.	.	.	.	.													.
Template Conservation															.	.	.	.																																		.	.	.	.	.
Template Sequence		A	H	T	M	S	E	V	K	Q	A	E	E	D	.	.	.	.	G	A	D	Y	V	G	L	G	P	I	Y	P	T	E	T	K	K	D	T	R	A	V	Q	G	V	S	L	I	E	A	V	R	R	.	.	.	.	.	Q	G	I	S	I	P	I	V	G	I	G	G	I	T	I	D	N	A	A	P	V	I	Q	A	G
Template Known Secondary structure				S											.	.	.	.	T		S							S	S				S	S	S	S						T	T									.	.	.	.	.	T	T									S	S			T	T	T	S						T	T
Template Predicted Secondary structure															.	.	.	.																																		.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		231	.	.	.	.	.	.	.	.	240	.	.				.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure														.	.	.
Query SS confidence														.	.	.
Query Sequence		A	N	F	V	A	V	G	V	D	T	M	L	.	.	.	Y	S	D	A	L	D	Q	R	L	A	M	F	K	S	G	K	N	G	P
Query Conservation														.	.	.
Alig confidence														.	.	.
Template Conservation
Template Sequence		A	D	G	V	S	M	I	S	A	I	S	Q	A	E	D	P	E	S	A	A	R	K	F	R	E	E	I	Q	T	Y	K	T	G	R
Template Known Secondary structure			S					S					T	S	S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions