Job Description P76469 Confidence 53.58% Date Thu Jan 5 12:23:13 GMT 2012 Rank 299 Aligned Residues 169 % Identity 15% Template d1vfsa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.90

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		G	H	G	A	V	P	C	A	R	A	A	Q	E	A	G	A	A	W	L	G	T	.	.	.	.	.	.	.	.	.	A	T	P	E	E	A	L	E	L	R	A	A	G	I	Q	G	R	I	M	C	W	L	W	T	P	G	G	P	W	R	E	A	I	E	T	D	.	.	.	.	I	D	V	S	V	S	G	M	W	A
Template Known Secondary structure		T	T													T							.	.	.	.	.	.	.	.	.	S	S										T	T			S									T	T									T	T	.	.	.	.							S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Q	V	V	S	A	T	R	Y	P	.	.	.	.	.	.	.	.	.	.	.	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	E	V	R	A	A	A	R	A	A	G	R	T	A	R	I	Q	L	A	D	T	G	L	G	R	N	G	C	Q	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	A	E	L	V	G	A	A	V	A	A	Q	A	E	G	T	V	Q	V	T
Template Known Secondary structure													T	S									S	S			S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																												.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.																					.
Query SS confidence																								.	.	.																					.
Query Sequence		F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	.	.	.	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	.	L	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V
Query Conservation																								.	.	.																					.
Alig confidence							.	.	.	.	.													.	.	.																					.
Template Conservation							.	.	.	.	.
Template Sequence		G	V	W	S	H	.	.	.	.	.	F	A	C	A	D	E	P	G	H	P	S	I	R	L	Q	L	D	A	F	R	D	M	L	A	Y	A	E	K	E	G	V	D	P	E	V	R	H	I	A	N	S	P	A	T	L	T	L	P	E	T	H	F	D	L	V	R	T	G	L
Template Known Secondary structure							.	.	.	.	.		S	S	T	T	S	T	T																					T	T				S														G	G	G		S	S						G
Template Predicted Secondary structure							.	.	.	.	.
Template SS confidence
		164	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions