|   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | F | K | E | R | L | R | K | G | E | V | Q | I | G | L | W | L | S | S | T | . |
. |
. |
. |
. |
. |
T | A | Y | M | A | E | I | A | A | T | S | G | Y | D | W | L | L | I | D | G | E | H | A | P | N | T | I | Q | D | L | Y | H | Q | L | Q | A | V | A | P | Y | A | S | Q | P | V | I | R | P | V | E | G | S | K |
Query Conservation |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|   | . | . | . |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
M | R | I | R | E | E | Y | G | K | D | Q | P | L | K | N | A | K | I | T | G | C | L | H | M | T | V | E | C | A | L | L | I | E | T | L | Q | K | L | G | A | Q | I | R | W | C | S | C | N | I | Y | S | T | A | D | Y | A | A | A | A | V | S | . |
. |
. |
T | L | E | N | V | T | V | F | A | W | K | N | E | T | L | E |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | T | T | T |
| T | T | T | T |
|  |  |  |  |  | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S | S | S |
|
|
|  |  |  |  |  |  |  | T | . | . | . | T | S | T | T |  |  |  |  |
|
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
81 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
P | L | I | K | Q | V | L | . |
. |
. |
. |
. |
. |
D | I | G | A | Q | T | L | L | I | P | M | V | D | T | A | E | Q | A | R | Q | V | V | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | T | R | Y | P | P | Y | G | E | R | G | V | G | A | S | V | A | R | A | A | R | W | G | R | I | E | N | Y |
Query Conservation |   |
. | . | . |   |   |
|   |   |   |
| . | . | . | . | . | . |
|   |
|
|   |
|
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
| . | . | . | . |
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |
| . | . | . | . |
|
|   |   |   |
|   |
|
|
|   |   |   |
|   |
Template Sequence |   |
E | Y | W | W | C | V | E | S | A | L | T | W | G | D | G | D | D | N | G | P | D | M | I | . |
. |
. |
. |
V | D | D | G | G | D | A | T | L | L | V | H | K | G | V | E | Y | E | K | L | Y | E | E | K | N | I | L | P | D | P | E | K | A | K | . |
. |
. |
. |
N | E | E | E | R | C | F | L | T | L | L | K | N | S | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
| S | S | S | S | S |
| S |
| S |  |  | . | . | . | . |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| G | G | G |
| S | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
|
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
  |
  |   |
139 | 140 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | Q | V | N | D | . |
. |
. |
. |
. |
S | L | C | L | L | V | Q | V | E | S | K | T | A | L | D | N | L | D | E | I | L | D | V | E | G | I | D | G | V | F | I | G | P | A | D |
Query Conservation |   |
  |   |   |
|
|   | . | . | . | . | . |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|   |
|
|   |
|   |
|
|
|
|   |
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |
|
|
Template Sequence |   |
L | K | N | P | K | K | W | T | N | I | A | K | K | I | I | G | V | S | E | E | T | T | T | G | V | L | R | L | K | K | M | D | K | Q | N | E | L | L | F | T | A | I | N | V | N | D |
Template Known Secondary structure |   |
T | T |
| T | T |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
181 | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |