Job Description P76469 Confidence 96.24% Date Thu Jan 5 12:23:13 GMT 2012 Rank 88 Aligned Residues 202 % Identity 20% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	A	L	L	S	N	P	F	K	E	R	L	R	K	G	E	V	Q	I	G	L	W	L	S	S	T	T	A	.	.	.	.	.	.	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	T	I	Q	D	L	Y	H
Query Conservation																															.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																								.	.	.	.	.	.									.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.																																						.
Template Sequence		M	T	T	L	.	.	E	A	F	A	K	A	R	S	E	G	R	A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	P	.	Y	A	D	L	L	E	I	G	L	P	Y	S	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V	Q	G	A	L	E
Template Known Secondary structure						.	.									T	T	B									T	T	S	S													G	G	.	G		S	S																							T	T
Template Predicted Secondary structure						.	.																																						.
Template SS confidence
		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	.	.	.	.	.	.	.	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																					.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	R	E	V	R	A	L	T	E	K	P	L	F	L	M	T	Y	L	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	P	D	L	P	.	P	D	E	D	P	G	L	V	R	L	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S																											T							T	T			.	G	G	G										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	I	G	L	E	T	V	F	L	L	A	P	T	S	T	D	A	R	I	A	T	V	V	R	H	.	A	T	G	F	V	Y	A	V	S	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	D	L	V	R	R	I	K	A	R	T	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			T									T	T											T	T	.			S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																										.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.																				.	.	180	.	.	.	.	.	.	.	.	.	190	.
			211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.																																					.	.	.
Query SS confidence		.																																					.	.	.
Query Sequence		.	K	A	A	G	F	L	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V	D	T	M	L	Y	S	D	A	.	.	.	L	D	Q	R	L	A	M	F	K	S	G
Query Conservation		.																																					.	.	.
Alig confidence		.																	.	.																			.	.	.
Template Conservation																			.	.
Template Sequence		P	V	A	V	G	F	G	V	S	G	K	A	T	A	A	Q	A	.	.	A	V	A	D	G	V	V	V	G	S	A	L	V	R	A	L	E	E	G	R	S	L	A	P	L	L	Q	E	I	R	Q	G
Template Known Secondary structure							S				S								.	.	T	T	S	S														T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions