Job Description P76469 Confidence 81.27% Date Thu Jan 5 12:23:13 GMT 2012 Rank 189 Aligned Residues 152 % Identity 21% Template d1ttja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.40

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																								.						.	.	.																																	.
Query SS confidence																																								.						.	.	.																																	.
Query Sequence		P	F	K	E	R	L	R	K	G	E	V	Q	I	G	L	W	L	S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	.	D	G	E	H	A	.	.	.	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	.
Query Conservation																																								.						.	.	.																																	.
Alig confidence																.																								.						.	.	.																																	.
Template Conservation																.
Template Sequence		M	T	K	E	R	L	S	H	P	K	F	V	I	A	.	A	Q	N	A	G	N	A	D	A	L	A	S	L	K	D	F	G	V	N	W	I	V	L	G	H	S	E	R	R	A	Y	Y	G	E	T	N	E	I	V	A	D	K	V	A	A	A	V	A	S	G	F	M	V	I	A	C	I	G	E	T	L	Q	E	R	E
Template Known Secondary structure										T	T					.		S				S										T	T							S								S																	T	T
Template Predicted Secondary structure																.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
													83	.	.	.	.					.	.	90	.	.	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.						.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.						.	.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	I	K	Q	V	L	.	.	.	.	D	I	G	A	Q	T	L	L	I	.	.	.	.	.	.	.	.	.	.	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.						.	.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.						.	.	.	.										.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	R	T	A	V	V	V	L	T	Q	I	A	A	I	A	K	K	L	K	K	A	D	W	A	K	V	V	I	A	Y	E	P	V	W	A	I	G	T	G	K	V	A	T	P	Q	Q	A	Q	E	A	H	A	L	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	V	S	S
Template Known Secondary structure		T	T															T	T			G	G	G	G	G	G								G	G	G	T	T	T	S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																				.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		K	I	G	A	D	V	A	G	E	L	R	I	L	Y	G	G	S	V	N	G	.	K	N	A	R	T	L	Y	Q	Q	R	D	V	N	G	F	L	V	G	G	A	S	L
Template Known Secondary structure			T														S	S			T	.	T	T						T	S	T	T							S	G	G	G	G
Template Predicted Secondary structure																						.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions