Job Description P76469 Confidence 99.89% Date Thu Jan 5 12:23:13 GMT 2012 Rank 21 Aligned Residues 211 % Identity 18% Template d1kbla1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 1.94

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.																												.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	K	G	E	V	Q	I	G	L	W	L	S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	.	L	I	D	G	E	H	A	P	N	T	I	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	Y	H	Q	L	Q	A	V
Query Conservation																																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	A	D	K	F	R	T	L	K	V	R	T	N	A	D	T	P	E	D	T	L	N	A	V	K	L	G	A	E	G	I	G	L	C	R	T	E	H	M	F	F	E	A	D	R	I	M	K	I	R	K	M	I	L	S	D	S	V	E	A	R	E	E	A	L	N	E	L	I	P	F	Q	K	G	D	F	K	A	M	Y
Template Known Secondary structure									S								S										T	T			S							T					S															S										T	T
Template Predicted Secondary structure
Template SS confidence
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
		65	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																															.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	Y	.	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	V	L	D	I	G	A	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	L	E	G	R	P	M	T	V	R	Y	L	D	P	P	L	H	E	F	V	P	H	T	E	E	E	Q	A	E	L	A	K	N	M	G	L	T	L	A	E	V	K	A	K	V	D	E	L	H	E	F	N	P	M	M	G	H	R	G	C	R	L	A	V	T	Y	P	E	I	A	K	M	Q	T	R	A	V	M	E
Template Known Secondary structure					T	T										S		G	G	G	G	S			S												T																S		G	G	G	S	S		T
Template Predicted Secondary structure
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
																		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	.	.	.	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	I	E	V	K	E	E	T	G	I	D	I	V	P	E	I	M	I	P	L	V	G	E	K	K	E	L	K	F	V	K	D	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	V	A	E	Q	V	K	K	E	K	G	S	D	M	Q	Y	H	I	G	T	M	I	E	I
Template Known Secondary structure																						S			S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T													S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.																					.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence														.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation														.	.
Template Sequence		P	R	A	A	L	T	A	D	A	I	A	E	.	.	E	A	E	F	F	S	F	G	T	N	D	L	T	Q	M	T	F	G	F	S	R	D	D	A	G	K	F	L	D	S	Y	Y	K	A	K	I	Y	E	S	D	P	F	A	R	L	D	Q	T	G	V	G	Q	L	V	E	M	A	V	K	K	G	R	Q	T	R	P
Template Known Secondary structure							T					T	T	.	.	T		S															T																T	T	S		S	S		T	T	T	S			T	T	T																	T
Template Predicted Secondary structure														.	.
Template SS confidence
		747	.	.	750	.	.	.	.	.	.	.	.			.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.
		210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		G	K	A	A	G	F	L	.	.	.	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V	D	T	M	L	Y	S	D
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		G	L	K	C	G	I	C	G	E	H	G	G	D	P	S	S	V	E	F	C	H	K	V	G	L	N	Y	V	S	C	S	P	F	R	V	P	I	A	R
Template Known Secondary structure		T							S	G	G	G	G	S										T	T		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		825	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions