Return to main results Retrieve Phyre Job Id

Job DescriptionP76469
Confidence92.51%DateThu Jan 5 12:23:13 GMT 2012
Rank122Aligned Residues209
% Identity12%Templated1ka9f_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40... ......50.........60....... ..70.........80.........90.........100.......
Predicted Secondary structure 



.







.
















Query SS confidence 













.























.







































Query Sequence  YMAEIAATSGYDWL. LIDGEHAPNTIQDLYHQLQAVAPY. ASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQ
Query Conservation     
  
  
 
 
. 

 

           
 
    .
    


       
   

 

 

  
 
   
 
  
Alig confidence 













.























.







































Template Conservation    
      

  
 
 

             
  
     


    

            

  
             
Template Sequence  EAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAAVRRPELI
Template Known Secondary structure  T
S


SSTT
TT

S
SS

ST
S

T
Template Predicted Secondary structure 
























Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   108.110.........120.........130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  VVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYP
Query Conservation   
 
 



 
 

                    

    
  



  

  
 

 
 



 
 

  


 


  
Alig confidence 







.......









































....







......




Template Conservation          .......        
         
                       ....
   

  ......     
Template Sequence  RELADHFG. . . . . . . AQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL. . . . GAGEILLT. . . . . . SMDRD
Template Known Secondary structure 
.......GGGTTTTTT....T

......TTTT
Template Predicted Secondary structure  .......


















....


......




Template SS confidence 















































































   115....120.. .......130.........140.........150.........160.... .....170.. .....
 
   188.190.........200.........210.........220.........230.........240.........250.......
Predicted Secondary structure 















Query SS confidence 





































































Query Sequence  DNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSG
Query Conservation       
    
   
   
   
   
               
        
   
  
           
Alig confidence 







.










.
















































Template Conservation      
   .  
  
     .  

  


 
  

      


 






             
   
Template Sequence  GTKEGYDL. RLTRMVAEAVG. VPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYLAEK
Template Known Secondary structure  TT
S


.
S.S
S


STT
SSTTSS
T
Template Predicted Secondary structure 






.

.
















Template SS confidence 





































































   178.180..... ....190...... ...200.........210.........220.........230.........240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions