Job Description P76469 Confidence 38.03% Date Thu Jan 5 12:23:13 GMT 2012 Rank 358 Aligned Residues 138 % Identity 14% Template d1bwva1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																			.				.	.	.	.																																																.	.	.	.	.	.	.	.
Query SS confidence																			.				.	.	.	.																																																.	.	.	.	.	.	.	.
Query Sequence		K	E	R	L	R	K	G	E	V	Q	I	G	L	W	L	S	S	.	T	T	A	.	.	.	.	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	.	.	.	.	.	.	.	.
Query Conservation																			.				.	.	.	.																																																.	.	.	.	.	.	.	.
Alig confidence																			.				.	.	.	.																			.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.
Template Sequence		K	A	S	A	A	T	G	E	V	K	G	H	Y	L	N	V	T	A	A	T	M	E	E	M	Y	A	R	A	N	F	A	K	E	L	G	S	V	I	I	M	I	D	L	.	.	.	V	I	G	Y	T	A	I	Q	T	M	A	K	W	A	R	D	N	D	M	I	L	H	L	H	R	A	G	N	S	T	Y	S	R	Q
Template Known Secondary structure								T	S			B								S	S														T	T		S						G	.	.	.	G	G															T	T								T	T	T					S
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
					77	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.																.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.														.											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.														.											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	E	G	S	K	P	L	I	K	Q	V	L	D	I	.	G	A	Q	T	L	L	I	P	M	V	.	.	.	.	.	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W
Query Conservation		.	.	.														.											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.														.											.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	H	G	M	N	F	R	V	I	C	K	W	M	R	M	A	G	V	D	H	I	H	A	G	T	V	V	G	K	L	E	G	D	P	I	I	T	R	G	F	Y	K	T	L	L	L	P	K	L	E	R	N	L	Q	E	G	L	F	F	D	M	E	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A
Template Known Secondary structure		T	T	S	S														T		S							S	S	S	S	S																	S					B	T	T	T	T	B		S					T	T										S	S			T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	M	H	Q	L	I	H	Y	L	G	E	D	V	V	L	Q	F
Template Known Secondary structure		T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions