Job Description P76469 Confidence 79.55% Date Thu Jan 5 12:23:13 GMT 2012 Rank 196 Aligned Residues 186 % Identity 9% Template d1bd0a2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.60

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		N	P	F	K	E	R	L	R	K	G	E	V	Q	I	G	L	W	L	S	.	.	.	.	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		E	N	L	R	R	L	L	P	D	D	T	H	I	M	A	V	V	K	A	N	A	Y	G	H	G	D	V	Q	V	A	R	T	A	L	E	A	G	A	S	R	L	A	V	.	.	.	.	.	.	.	.	.	A	F	L	D	E	A	L	A	L	R	E	K	G	I	E	A	P	I	L	V	L	G	A	S	R	P	A	D
Template Known Secondary structure								S		T	T													T	T													T							.	.	.	.	.	.	.	.	.	S	S										T	T			S						S				G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.										.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	L	A	A	Q	Q	R	.	.	.	.	I	A	L	T	V	F	R	S	D	W	L	E	E	A	S	A	L	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	F	P	I	H	F	H	L	K	M	D	T	G	M	G	R	L	G	V	K
Template Known Secondary structure								T	T	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S								B		S	S	S		S	S	S	B
Template Predicted Secondary structure										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																													120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	.	G	F	L	A	V	A	P	D	M	A	Q	Q	C	L	A	W	G	A
Query Conservation																																																															.
Alig confidence																												.	.	.	.	.																															.
Template Conservation																												.	.	.	.	.
Template Sequence		D	E	E	E	T	K	R	I	V	A	L	I	E	R	H	P	H	F	V	L	E	G	L	Y	T	H	.	.	.	.	.	F	A	T	A	D	E	V	N	T	D	Y	F	S	Y	Q	Y	T	R	F	L	H	M	L	E	W	L	P	S	R	P	P	L	V	H	C	A	N	S	A	A	S	L	R	F	P	D	R	T	F
Template Known Secondary structure		S														S	T	T										.	.	.	.	.		S	S	T	T	S	S																	T	T		S	S			S														T	T	S		T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		232	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	V	A	V	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	M	V	R	F	G	I
Template Known Secondary structure		T						G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions