Job Description P76469 Confidence 84.60% Date Thu Jan 5 12:23:13 GMT 2012 Rank 177 Aligned Residues 129 % Identity 21% Template d1b9ba_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.85

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.																	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																.								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	A	A	T	S	G	Y	D	W	L	L	I	.	D	G	E	H	A	P	N	.	.	.	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	K	Q	V	L	D	I	G	A
Query Conservation																.								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.								.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	M	L	Q	E	I	G	V	E	Y	V	I	V	G	H	S	E	R	R	R	I	F	K	E	D	D	E	F	I	N	R	K	V	K	A	V	L	E	K	G	M	T	P	I	L	C	V	G	E	T	L	E	E	R	E	K	G	L	T	F	C	V	V	E	K	Q	V	R	E	G	F	Y	G	L	D	K	E	E	A
Template Known Secondary structure							T	T	T							S							T	S																	T	T																	T															T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		92	.	.	.	.											.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	L	L	I	.	.	.	.	.	.	.	.	.	.	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L
Query Conservation							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		K	R	V	V	I	A	Y	E	P	V	W	A	I	G	T	G	R	V	A	T	P	Q	Q	A	Q	E	V	H	A	F	I	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	L	S	E	M	Y	D	E	E	T	A	G	S	I	R	I	L	Y	G	G	S	I	.	K	P	D	N	F
Template Known Secondary structure		T	T								G	G	G	S	S	S	S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S								S						S	S		.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.																				.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	L	I	V	Q	K	D	I	D	G	G	L	V	G	G	A	S	L
Template Known Secondary structure		T	T	T	S	S	S	T	T							S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions