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Job DescriptionP76469
Confidence96.55%DateThu Jan 5 12:23:13 GMT 2012
Rank86Aligned Residues183
% Identity17%Templatec3thaB_
PDB info PDB header:lyaseChain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni.
Resolution2.37 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20......... 30.........40...... ...50.........60........
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Query Sequence  KGEVQIGLWLSSTTA. . . . . . YMAEIAATSGYDWLLID. . . . . . . . . . . . . . . . . . . . GEHAPNTIQDLYHQLQAVAPYA
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Template Sequence  YKENANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGV. DIHSVFELLARIKT. K
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SSSTTSS
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   8.10.........20.........30.........40.........50.........60.........70 .........80.... .
 
   6970..... ....80.........90.........100.........110.........120.........130.........140..
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Query Sequence  SQPVIRP. . . . . . VEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQV
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Template Sequence  KALVFXVYYNLIFSYGLEKFVKKAKSLGICALIVPE. LSFEESDDLIKECE. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S


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   86...90.........100.........110.........120. ........130.....
 
   143......150.........160.........170.........180.........190.........200......... 210........ .
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Query Sequence  NDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAA. GKAAGFLAV. . A
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Template Sequence  RYNIALITLVSVTTPKERVKKLVKH. AKGFIYLL. . . . . ASIGITGTK. . SVEEAILQDKVKEIRSFTNLPIFVGFGIQN
Template Known Secondary structure  T


TTS
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   136...140.........150.........160 ........ .170....... ..180.........190.........200.......
 
   220.........230........
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Query Sequence  PDMAQQCLAWGANFVAVGV
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Template Sequence  NQDVKR. XRKVADGVIVGT
Template Known Secondary structure  S.TTTSS
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   208.210... ......220.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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