Job Description P76469 Confidence 99.92% Date Thu Jan 5 12:23:13 GMT 2012 Rank 16 Aligned Residues 213 % Identity 14% Template c3r4iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:citrate lyase; PDBTitle: crystal structure of a citrate lyase (bxe_b2899) from burkholderia2 xenovorans lb400 at 2.24 a resolution Resolution 2.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.							.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																								.	.	.	.	.	.																									.	.	.	.
Query SS confidence																				.	.	.	.	.																								.	.	.	.	.	.																									.	.	.	.
Query Sequence		S	S	T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	.	.	.	.	.	L	L	I	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	.	.	.	.	.	.	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	K	Q	V	L	D	I	.	.	.	.
Query Conservation																				.	.	.	.	.																								.	.	.	.	.	.																									.	.	.	.
Alig confidence																				.	.	.	.	.																								.	.	.	.	.	.																									.	.	.	.
Template Conservation
Template Sequence		Y	A	G	S	E	K	L	X	L	K	S	L	A	L	Q	Q	Q	L	G	P	V	F	D	I	T	L	D	C	E	D	G	A	Q	V	G	R	E	A	Q	H	A	E	L	V	A	S	L	L	G	S	E	H	D	R	F	G	R	V	G	V	R	I	H	D	F	D	H	A	H	W	R	D	D	V	R	L	I	L	R	A
Template Known Secondary structure					S																T	T							S	S	T	T	S		S	S													T	T	S	S	S			S	S									T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D
Query Conservation		.	.	.
Alig confidence		.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	R	A	P	A	Y	I	T	L	P	K	I	R	H	V	H	D	A	A	E	X	V	A	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	T	R	R	E	L	G	I	A	Q	P	V	P	V	Q	L	L	V	E	T	H	G	A	L	T	R	V	F	D	L	A	A
Template Known Secondary structure			S	S			S									S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		S	S										S						T						T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.										220	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	.	.	.	.	.	.	.	.	.	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	A	V	A	.	.	.	.	.	.	.	.	.	P	D	M	A	Q	Q	C	L	A
Query Conservation																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	G	V	E	A	L	S	F	G	L	X	D	F	V	S	A	H	D	G	A	I	P	D	T	A	X	R	S	P	G	Q	F	D	H	P	L	V	R	R	A	K	L	E	I	S	A	A	C	H	A	Y	G	K	V	P	S	H	N	V	S	T	E	V	R	D	X	S	V	V	A	N	D	A	A	R	A	R	N	E
Template Known Secondary structure			T	T														T	T	T	T	S	S		G	G	G	G	S	T	T					S																	T	T											S	S															T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		229	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		W	G	A	N	.	.	F	V	A	V	G	V	D	T	M	L	Y	S	D	A	L	D	Q	R	L	A	M	F	K	S	G	K
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		F	G	Y	T	R	X	W	S	I	H	P	A	Q	I	E	A	I	V	A	A	F	A	P	R	D	E	E	I	T	T	A	T
Template Known Secondary structure		T			S					S	S											T	S			T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions