Job Description P76469 Confidence 99.94% Date Thu Jan 5 12:23:13 GMT 2012 Rank 12 Aligned Residues 211 % Identity 14% Template c3qqwC_ PDB info PDB header:lyase Chain: C: PDB Molecule:putative citrate lyase; PDBTitle: crystal structure of a hypothetical lyase (reut_b4148) from ralstonia2 eutropha jmp134 at 2.44 a resolution Resolution 2.44 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.												.	.	.	.	.	.																																					.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.												.	.	.	.	.	.																																					.	.	.	.	.	.
Query Sequence		T	T	A	Y	M	A	E	I	A	A	T	S	G	Y	D	W	.	.	.	.	.	L	L	I	D	G	E	H	A	P	N	T	.	.	.	.	.	.	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	A	S	Q	P	V	I	R	P	V	E	G	S	K	P	L	I	K	Q	V	L	D	I	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.												.	.	.	.	.	.																																					.	.	.	.	.	.
Alig confidence																		.	.	.	.	.												.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	E	K	L	I	G	K	A	X	D	L	Q	V	E	Y	G	P	V	F	D	V	T	C	D	C	E	D	G	A	A	A	G	Q	E	R	E	H	A	E	X	V	A	R	X	I	A	S	D	R	N	V	H	G	R	A	G	A	R	I	H	D	P	S	H	P	A	W	R	Q	D	V	D	I	I	V	N	G	A	G
Template Known Secondary structure			S																S	S							S	T	T	T	S		T	T															S	T	T			S										T	T	S	T	T												S	T
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E
Query Conservation		.
Alig confidence		.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	L	A	Y	I	T	V	P	K	A	T	N	S	G	Q	V	A	E	V	I	R	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	V	A	K	R	A	G	L	D	K	P	V	P	V	H	V	L	I	E	T	H	G	A	L	R	D	V	F	Q	I	A	E	L	P
Template Known Secondary structure		T												S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		S	S										S						T					T	T	S	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220									.	.	.	.	.	.	.		.	.	230
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.								.
Query SS confidence																				.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.								.
Query Sequence		G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	.	.	.	.	.	.	.	.	.	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	A	V	A	P	.	.	.	.	.	.	.	.	D	M	A	Q	Q	C	L	.	A	W	G
Query Conservation																				.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.								.
Alig confidence																				.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.								.
Template Conservation
Template Sequence		N	I	E	V	L	D	F	G	L	X	D	F	V	S	G	H	H	G	A	I	P	A	A	A	X	R	S	P	G	Q	F	E	H	A	L	L	V	R	A	K	A	D	X	V	A	A	A	L	A	N	G	I	V	P	A	H	N	V	C	L	N	L	K	D	A	E	V	I	A	S	D	A	C	R	A	R	N	E	F	G
Template Known Secondary structure		T														T	T	T	T		S		G	G	G	G	S	T	T	G	G	G	T	S																	T	T									S		S	S																T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		231	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		A	N	.	.	F	V	A	V	G	V	D	T	M	L	Y	S	D	A	L	D	Q	R	L	A	M	F	K	S	G	K
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		F	L	R	X	W	S	I	Y	P	A	Q	I	Q	P	I	V	N	A	X	R	P	D	F	T	E	V	E	D	A	A
Template Known Secondary structure								S	S	G	G	G									S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions