|   |
57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | H | Q | L | Q | A | V | A | P | Y | A | S | Q | P | V | I | R | P | V | E | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | K | P | L | I | K | Q | V | L | D | I | G | A | Q | T | L | L | I | . |
. |
. |
. |
. |
P | M | V | D | T | A | E | Q | A | R | Q | V | V | S | A | T | R | Y | P | P | Y |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
|
|   |   | . | . | . | . | . |
|   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
Template Sequence |   |
A | K | H | V | H | L | L | A | K | A | Y | G | V | P | V | I | L | H | T | D | H | A | A | R | K | L | L | P | W | I | D | G | L | I | E | A | N | A | Q | Y | K | K | T | H | G | Q | A | L | F | S | S | H | M | L | D | L | S | E | E | S | L | E | E | N | L | S | T | C | E | V | Y | L | Q | K | L | D | A | L | G | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
| S |
| S |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
  |
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
. | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | R | G | V | G | A | S | V | A | R | A | A | R | W | G | R | I | E | N | Y | M | A | Q | V | N | D | S | L | C | L | L | V | Q | V | E | S | K | T | A | L | D | N | L | D | E | I | L | D | V | E | G | I | D | G | V | F | I | G | P | A | D | L | S | A | S | L | G | Y | P | . |
D | N | A | G | H | P | E | V | Q |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|
|
|
|   |   |
|
|   |   |
|   |
|
|   |
|   |
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|
|   |   | . |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |   |
|
|   |   |
|
|
|
|   |   | . | . | . |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |
Template Sequence |   |
A | L | E | I | E | L | G | C | T | G | G | D | N | T | G | I | D | N | S | K | L | Y | T | Q | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | D | V | A | L | A | Y | E | R | L | G | K | I | S | D | . |
. |
. |
K | F | S | I | A | A | S | F | G | N | V | H | G | V | S | L | Q | P | E | I | L |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
| S | S | T | T |
| T | T | T | S |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | . | . | . |
|  |  |  |  |
|
| S | S |
|
|
|
|
|
|
|
| T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
  |
  |   |
197 | . | . | 200 | . | . | . | . | |
|
|
|
. | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | I | E | T | S | I | R | . |
. |
. |
. |
R | I | R | A | A | G | K | A | A | G | F | L | A | V | . |
. |
. |
A | P | D | M | A | Q | Q | C | L | A | W | G | A | N | F | V | A | V | G | V | D | T | M | L | Y | S | D | A | L | D | Q | R | L | A | M | F |
Query Conservation |   |
  |
|   |   |   |
|   |   | . | . | . | . |   |
|   |   |   |
|   |   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |   |
|
|   |
|
|
|
|   |
|
| . | . | . |
|   |   |
|   |   |   |   |
|
|   |   |
Template Sequence |   |
K | N | S | Q | K | F | V | K | D | K | F | A | L | N | S | D | K | P | I | N | F | V | F | H | G | G | S | G | S | E | L | K | D | I | K | N | A | V | S | Y | G | V | I | K | M | N | I | D | T | D | . |
. |
. |
T | Q | W | A | F | W | D | G | V | R | E | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
| S |
| S |
|
| S |
|  |  |  |
|
|
| T | T |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | |
|
|
. | . | . | 290 | . | . | . | . | . | . | . | . |
  |