 |
Job Description | P76469 | Confidence | 83.74% | Date | Thu Jan 5 12:23:13 GMT 2012 |
Rank | 180 | Aligned Residues | 72 |
% Identity | 21% | Template | c3pg8B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; |
PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima
|
Resolution | 2.00 Å |
|
 |
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | S | K | T | A | L | D | N | L | D | E | I | L | D | V | E | G | I | D | G | V | F | I | G | P | A | D | L | S | A | S | L | G | Y | P | D | N | A | G | H | P | E | V | Q | R | I | I | E | T | S | I | R | R | I | R | A | A | G | K | A | A | G | F | L | A | V | A | P | D | M | A | Q | Q | C | L | A | W | G | A |
Query Conservation |   |
|
|
|   |   |
|
|   |   |
|   |
|
|   |
|   |
|
|
|
|   |
|   |
|
|   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |
|
|   |   |   |   |   | . |
|
Template Sequence |   |
V | E | G | R | E | M | L | M | E | T | A | H | F | L | S | E | L | G | V | K | V | L | R | G | G | A | Y | K | L | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | K | G | L | E | Y | L | R | E | A | A | D | K | Y | G | M | Y | V | V | T | E | A | L | G | E | D | D | L | P | K | V | A | E | Y | . |
A |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
| . |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S | G | G | G |  |  |  |  |  |  |  | . |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | |
. |
  |
  |   |
232 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
N | F | V | A | V | G | V |
Query Conservation |   |
  |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
Template Sequence |   |
D | I | I | Q | I | G | A |
Template Known Secondary structure |   |
S |  |  |  |  |
| G |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|