Job Description P76469 Confidence 34.58% Date Thu Jan 5 12:23:13 GMT 2012 Rank 376 Aligned Residues 126 % Identity 19% Template c3ng3A_ PDB info PDB header:lyase Chain: A: PDB Molecule:deoxyribose-phosphate aldolase; PDBTitle: crystal structure of deoxyribose phosphate aldolase from mycobacterium2 avium 104 in a schiff base with an unknown aldehyde Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		81	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																.								.	.	.	.	.	.	.	.	.
Query SS confidence																.								.	.	.	.	.	.	.	.	.
Query Sequence		P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	.	L	I	P	M	V	D	T	.	.	.	.	.	.	.	.	.	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V
Query Conservation																.								.	.	.	.	.	.	.	.	.
Alig confidence																.								.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	E	A	A	L	A	V	A	S	G	A	A	E	I	D	M	V	I	D	V	G	A	A	L	A	G	D	L	D	G	V	R	A	D	I	A	A	V	R	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	A	V	L	K	V
Template Known Secondary structure										T	T		S													T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																																120	.	.	.	.	.	.
		151	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.
Query Sequence		Q	V	E	S	K	.	.	.	.	.	.	.	.	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	A	V	A	P	D	M
Query Conservation							.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																									.	.	.	.	.	.																			.	.
Template Conservation																																							.	.	.	.	.	.																			.	.
Template Sequence		I	V	E	S	S	A	L	L	A	L	A	D	E	H	T	L	V	R	V	C	R	A	A	E	D	A	G	A	D	F	V	K	T	S	T	G	F	.	.	.	.	.	.	H	P	S	G	G	A	S	V	R	A	V	A	L	M	A	E	A	V	.	.	G	G	R	L	G	V	K	A	S	G	G	I	R	T	A	A	D
Template Known Secondary structure												S															T	T		S							S		.	.	.	.	.	.		T	T		S														.	.	T	T	S	S						S	S			S
Template Predicted Secondary structure																																							.	.	.	.	.	.																			.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V	D	T	M	L	Y	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	M	L	D	A	G	A	T	R	L	G	L	S	G	T	R	A	V	L	D	G
Template Known Secondary structure								T	T		S					S	S							T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions