Job Description P76469 Confidence 41.97% Date Thu Jan 5 12:23:13 GMT 2012 Rank 341 Aligned Residues 178 % Identity 10% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																							.	.	.														.	.	.	.																			.
Query SS confidence																		.	.	.																							.	.	.														.	.	.	.																			.
Query Sequence		Y	M	A	E	I	A	A	T	S	G	Y	D	W	L	L	I	.	.	.	D	G	E	H	A	P	N	T	I	Q	D	L	Y	H	Q	L	Q	A	V	A	P	Y	.	.	.	A	S	Q	P	V	I	R	P	V	E	G	S	K	.	.	.	.	P	L	I	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	.
Query Conservation																		.	.	.																							.	.	.														.	.	.	.																			.
Alig confidence																		.	.	.																							.	.	.														.	.	.	.																			.
Template Conservation
Template Sequence		R	S	I	E	R	L	I	D	G	G	V	H	A	I	A	P	L	G	S	T	G	E	G	A	Y	L	S	D	P	E	W	D	E	V	V	D	F	T	L	K	T	V	A	H	R	V	P	T	I	V	S	V	S	D	L	T	T	A	K	T	V	R	R	A	Q	F	A	E	S	L	G	A	E	A	V	X	V	L	P	I
Template Known Secondary structure										T	T		S					S	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
						99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A	L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																			.
Template Conservation																																								.
Template Sequence		S	Y	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	G	V	P	V	X	L	Y	N	N	P	G	T	S	G	I	D	X	.	S	V	E	L	I	L	R	I	V	R	E	V	D	N	V	T	X	V	K	E	S	T	G	D	I	Q	R	X	H	K	L	R	L	L	G	E	G	R	V	P	F
Template Known Secondary structure			S	S																			S	S												S				.												S	T	T								S	S												T	T	T		S
Template Predicted Secondary structure																																								.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		175	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.															.	.
Query SS confidence								.	.	.															.	.
Query Sequence		I	G	P	A	D	L	.	.	.	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	.	.	V	Q	R	I	I	E	T	S	I	R	R	I	R	A
Query Conservation								.	.	.															.	.
Alig confidence								.	.	.															.	.
Template Conservation
Template Sequence		Y	N	G	N	P	L	A	L	E	A	F	V	A	G	A	K	G	W	C	S	A	A	P	N	L	I	P	T	L	N	G	Q	L	Y	Q	A	V	L	D
Template Known Secondary structure						T	T								T		S					S	G	G	G	T														T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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