Job Description P76469 Confidence 99.20% Date Thu Jan 5 12:23:13 GMT 2012 Rank 42 Aligned Residues 135 % Identity 16% Template c3ma8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of cgd1_2040, a pyruvate kinase from cryptosporidium2 parvum Resolution 2.64 Å

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		79	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		S	K	P	L	I	.	K	Q	V	L	D	I	G	A	Q	T	L	L	I	P	M	V	D	T	A	E	Q	A	R	Q	V	V	S	A	T	R	Y	P	P	Y	G	E	R	G	V	G	A	S	V	A	R	A	A	R	W	G	R	I	E	N	Y	M	A	Q	V	N	D	S	L	C	L	L	V	Q	V	E	S	K	T	A
Query Conservation							.
Alig confidence							.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	R	H	D	I	V	D	F	A	L	K	Y	N	L	D	F	I	A	L	S	F	V	Q	N	G	A	D	V	Q	L	C	R	Q	I	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	T	Q	Y	S	N	G	I	P	S	S	I	K	I	I	S	K	I	E	N	L	E	G
Template Known Secondary structure								T	T	T	T	T	T	T		S						S			S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T	T													S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																					.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.															.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	N	L	D	E	I	L	D	V	E	G	I	D	G	V	F	I	G	P	A	D	L	S	A	S	L	G	Y	P	D	N	A	G	H	P	E	V	Q	R	I	I	E	T	S	I	R	R	I	R	A	A	G	K	A	A	G	F	L	A	V	A	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																	.	.	.	.	.	.
Template Sequence		V	I	N	F	D	S	I	C	S	.	.	E	S	D	G	I	M	V	A	R	G	D	L	G	M	E	I	.	.	.	.	.	.	P	P	E	K	I	F	V	A	Q	K	C	M	I	S	K	C	N	V	A	G	K	P	V	V	T	A	T	Q	M	L	E	S	M	I	K	S	N	R	P	T	R	A	E	M	T	D	V
Template Known Secondary structure				T							.	.		S	S													S	.	.	.	.	.	.																				T							S	S	S	S	G	G	G	G	T	S	S	S
Template Predicted Secondary structure											.	.																	.	.	.	.	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.			.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.							310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	C	L	A	W	G	A	N	F	V	A	V	G	V	D	T	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	A	V	L	D	G	S	D	C	V	M	L	S	G	E	T	A
Template Known Secondary structure								T		S					S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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